Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is 109947123
Identifier: 109947123
GI number: 109947123
Start: 456598
End: 457119
Strand: Direct
Name: 109947123
Synonym: Hac_0530
Alternate gene names: NA
Gene position: 456598-457119 (Clockwise)
Preceding gene: 109947122
Following gene: 109947124
Centisome position: 29.38
GC content: 37.16
Gene sequence:
>522_bases ATGCGTTTTAGTTACATTGAGCCAAGAGCGAAATACCTTATCAGCAAGCTTTCTAAAATCTGGATTTTTTACATTTTTTT ATCGCTTGTTCTTATTGGAGGGTTAGTGGGGTTTATGCACCATGCCATTGATAACGCTCAAAATGACATAGCTAGTTTAA CAATCCAAGAAAAGCTTTACCGCCATGAGACTAGCCGTTTGCAAGCAAAAACCGCTGAAACCTTGCAACTCATTAAAGAG GCTAAAAAGCGTTTGAATTACAATGACGATGTGCGCGATGTTTTACAAGGGCTTTTGAATATTGTGCCAGATCTTATCAC TATCAATAGCATTGAAATAGATCAGCAAAGCGTGGTGATTAGCGGTAAAGCCCCTTCTAAAGAGGCTTTTTATTTTTTAT TCCAAAACAAGTTAAACCCCATGTTTGATTATTCTAGCGTGGAATTTTTCCCCTTAAGCGATGGGTGGTTTAATTTTGTT TCCAATAACTCTTCTAATTCCTTATTGATAAGCAACCCTTGA
Upstream 100 bases:
>100_bases TTGATGCATTTGCAAGAAACTTTGATGATGGAAGTGGATAGGTTGGATTTTTCTTTAGTGGAGCAATTGAATGTTTTAGC GTGCATGGAGAATGAAAAGT
Downstream 100 bases:
>100_bases TGGGAGGAACATGAAACAATTGCATTTTTCACACCTGGATAGAGAGCAATCAGGCGATGTGGGTTTTATCATTAAAAACC TTGTTTTTTTAGGGGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MRFSYIEPRAKYLISKLSKIWIFYIFLSLVLIGGLVGFMHHAIDNAQNDIASLTIQEKLYRHETSRLQAKTAETLQLIKE AKKRLNYNDDVRDVLQGLLNIVPDLITINSIEIDQQSVVISGKAPSKEAFYFLFQNKLNPMFDYSSVEFFPLSDGWFNFV SNNSSNSLLISNP
Sequences:
>Translated_173_residues MRFSYIEPRAKYLISKLSKIWIFYIFLSLVLIGGLVGFMHHAIDNAQNDIASLTIQEKLYRHETSRLQAKTAETLQLIKE AKKRLNYNDDVRDVLQGLLNIVPDLITINSIEIDQQSVVISGKAPSKEAFYFLFQNKLNPMFDYSSVEFFPLSDGWFNFV SNNSSNSLLISNP >Mature_173_residues MRFSYIEPRAKYLISKLSKIWIFYIFLSLVLIGGLVGFMHHAIDNAQNDIASLTIQEKLYRHETSRLQAKTAETLQLIKE AKKRLNYNDDVRDVLQGLLNIVPDLITINSIEIDQQSVVISGKAPSKEAFYFLFQNKLNPMFDYSSVEFFPLSDGWFNFV SNNSSNSLLISNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19858; Mature: 19858
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSYIEPRAKYLISKLSKIWIFYIFLSLVLIGGLVGFMHHAIDNAQNDIASLTIQEKLY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHETSRLQAKTAETLQLIKEAKKRLNYNDDVRDVLQGLLNIVPDLITINSIEIDQQSVVI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCEEEE SGKAPSKEAFYFLFQNKLNPMFDYSSVEFFPLSDGWFNFVSNNSSNSLLISNP ECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCCEEEEECC >Mature Secondary Structure MRFSYIEPRAKYLISKLSKIWIFYIFLSLVLIGGLVGFMHHAIDNAQNDIASLTIQEKLY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHETSRLQAKTAETLQLIKEAKKRLNYNDDVRDVLQGLLNIVPDLITINSIEIDQQSVVI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCEEEE SGKAPSKEAFYFLFQNKLNPMFDYSSVEFFPLSDGWFNFVSNNSSNSLLISNP ECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA