Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is 109947124

Identifier: 109947124

GI number: 109947124

Start: 457139

End: 457669

Strand: Direct

Name: 109947124

Synonym: Hac_0531

Alternate gene names: NA

Gene position: 457139-457669 (Clockwise)

Preceding gene: 109947123

Following gene: 109947125

Centisome position: 29.42

GC content: 34.46

Gene sequence:

>531_bases
TTGCATTTTTCACACCTGGATAGAGAGCAATCAGGCGATGTGGGTTTTATCATTAAAAACCTTGTTTTTTTAGGGGTTTT
TTCCTTGTTGAGTTGGTTTAATACCGAATATTTTCTATGGCCGAGCATGTTGGAATTAAAAAAAATCCTTTTAGAGGAAA
ACCGCAAAAAAAGCGTTTTAGAATACGCGCAAAGGCATTTTGAAACAGCCCTTATGAATTATCGCAATCAAAAAGAGACG
GGCGAATCTTTATTGAAAATCTTTAACGCTGAAGAGTCCAAAAATATCTTAGAAAAGATTTTAAAAAAATGTTTTGATGG
CTATGAGATCAAGCCCTTACTCTCTCAAAACCCCTCTCAAGAAACCCAATTTTTTATCATAGCTAGAGTGAGCGAATTAG
AAAAGACTTATCTTTTTTTCACCTTGCTTAACAAATATTTACCCAGCGCTCAAAGCCAATTACCCTTAAAGATTTCTAAA
GATAATGATGGGTTGTTGGTGCAATTTAGCGTGAATATTGGTTTGCAATAA

Upstream 100 bases:

>100_bases
GAATTTTTCCCCTTAAGCGATGGGTGGTTTAATTTTGTTTCCAATAACTCTTCTAATTCCTTATTGATAAGCAACCCTTG
ATGGGAGGAACATGAAACAA

Downstream 100 bases:

>100_bases
GGCGATTTATGGGTGGTTTTGATTTTAATTTTGACAATAAAGCATGCGAGAATTGTGGGGCAAAGTGTTGCGTGGGGGAA
AGCGGGTATATTTTTGTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MHFSHLDREQSGDVGFIIKNLVFLGVFSLLSWFNTEYFLWPSMLELKKILLEENRKKSVLEYAQRHFETALMNYRNQKET
GESLLKIFNAEESKNILEKILKKCFDGYEIKPLLSQNPSQETQFFIIARVSELEKTYLFFTLLNKYLPSAQSQLPLKISK
DNDGLLVQFSVNIGLQ

Sequences:

>Translated_176_residues
MHFSHLDREQSGDVGFIIKNLVFLGVFSLLSWFNTEYFLWPSMLELKKILLEENRKKSVLEYAQRHFETALMNYRNQKET
GESLLKIFNAEESKNILEKILKKCFDGYEIKPLLSQNPSQETQFFIIARVSELEKTYLFFTLLNKYLPSAQSQLPLKISK
DNDGLLVQFSVNIGLQ
>Mature_176_residues
MHFSHLDREQSGDVGFIIKNLVFLGVFSLLSWFNTEYFLWPSMLELKKILLEENRKKSVLEYAQRHFETALMNYRNQKET
GESLLKIFNAEESKNILEKILKKCFDGYEIKPLLSQNPSQETQFFIIARVSELEKTYLFFTLLNKYLPSAQSQLPLKISK
DNDGLLVQFSVNIGLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20608; Mature: 20608

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFSHLDREQSGDVGFIIKNLVFLGVFSLLSWFNTEYFLWPSMLELKKILLEENRKKSVL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHCCCHHHHH
EYAQRHFETALMNYRNQKETGESLLKIFNAEESKNILEKILKKCFDGYEIKPLLSQNPSQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCC
ETQFFIIARVSELEKTYLFFTLLNKYLPSAQSQLPLKISKDNDGLLVQFSVNIGLQ
CHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEECCCCC
>Mature Secondary Structure
MHFSHLDREQSGDVGFIIKNLVFLGVFSLLSWFNTEYFLWPSMLELKKILLEENRKKSVL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHCCCHHHHH
EYAQRHFETALMNYRNQKETGESLLKIFNAEESKNILEKILKKCFDGYEIKPLLSQNPSQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCC
ETQFFIIARVSELEKTYLFFTLLNKYLPSAQSQLPLKISKDNDGLLVQFSVNIGLQ
CHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA