Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is 109947067
Identifier: 109947067
GI number: 109947067
Start: 414083
End: 414562
Strand: Direct
Name: 109947067
Synonym: Hac_0465
Alternate gene names: NA
Gene position: 414083-414562 (Clockwise)
Preceding gene: 109947066
Following gene: 109947068
Centisome position: 26.65
GC content: 33.75
Gene sequence:
>480_bases ATGAATATTTTTCAAGCGAGTTTGTGTGTGGGATTACTTTTTTTTGGAGGGGTTTTATTGGGGGGTTCGCCTAAAGTCTT TAAAGTTAAGGTGGATAAAAGTTGGGGCGTGCCTTTTTTAAATGTGCTTTCTATGGCTTTTAAACAAGACATGCAAAAAG AGATCATTTTTGTGATCACAAAAAACAACAAATTGAATAAAAAAGTGCTTTGTGATTTTGACGCCTTTTTATTGCCTGAG TCTGAAATGAGAGACATGCCCGCAAAAGCGCTTTTCGATAAAGAGTTTTTATTCCAGTCTAAAGAAAATAAAACACTCTA TACATTTTCGCTCATTGATGCTCAATATTGCTCAAAAAGTAGGAATTATCAATACCAATTAGAAGCTTTGGAGCGTTGGT TTATGCAAAAAGTACCTGAATTAGCTGAAAGTTATAGGGTGAATTACAAAAACCAATACGACAAAAAAACAAAGCAATAA
Upstream 100 bases:
>100_bases GGAATTAAAAGCATAGATCAATCCTTTAGTTTTTATATTATAATACCCAACCAATGCCTTTAATTTCTGTTTTCAATATT AACGCTTAAAGGATTAAAAG
Downstream 100 bases:
>100_bases AGAATAAACGATGATTGTAGTATTAGATTTTGGGAGCCAATACACACAGCTGATTGCTAGAAGATTAAGAGAGAGCGGGA TTTACGCTGAAATAGTCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MNIFQASLCVGLLFFGGVLLGGSPKVFKVKVDKSWGVPFLNVLSMAFKQDMQKEIIFVITKNNKLNKKVLCDFDAFLLPE SEMRDMPAKALFDKEFLFQSKENKTLYTFSLIDAQYCSKSRNYQYQLEALERWFMQKVPELAESYRVNYKNQYDKKTKQ
Sequences:
>Translated_159_residues MNIFQASLCVGLLFFGGVLLGGSPKVFKVKVDKSWGVPFLNVLSMAFKQDMQKEIIFVITKNNKLNKKVLCDFDAFLLPE SEMRDMPAKALFDKEFLFQSKENKTLYTFSLIDAQYCSKSRNYQYQLEALERWFMQKVPELAESYRVNYKNQYDKKTKQ >Mature_159_residues MNIFQASLCVGLLFFGGVLLGGSPKVFKVKVDKSWGVPFLNVLSMAFKQDMQKEIIFVITKNNKLNKKVLCDFDAFLLPE SEMRDMPAKALFDKEFLFQSKENKTLYTFSLIDAQYCSKSRNYQYQLEALERWFMQKVPELAESYRVNYKNQYDKKTKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18634; Mature: 18634
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIFQASLCVGLLFFGGVLLGGSPKVFKVKVDKSWGVPFLNVLSMAFKQDMQKEIIFVIT CCCHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEE KNNKLNKKVLCDFDAFLLPESEMRDMPAKALFDKEFLFQSKENKTLYTFSLIDAQYCSKS CCCCCCCEEEECCHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHCC RNYQYQLEALERWFMQKVPELAESYRVNYKNQYDKKTKQ CCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNIFQASLCVGLLFFGGVLLGGSPKVFKVKVDKSWGVPFLNVLSMAFKQDMQKEIIFVIT CCCHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEE KNNKLNKKVLCDFDAFLLPESEMRDMPAKALFDKEFLFQSKENKTLYTFSLIDAQYCSKS CCCCCCCEEEECCHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHCC RNYQYQLEALERWFMQKVPELAESYRVNYKNQYDKKTKQ CCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA