| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is aroP [H]
Identifier: 108812540
GI number: 108812540
Start: 2662618
End: 2663991
Strand: Reverse
Name: aroP [H]
Synonym: YPN_2379
Alternate gene names: 108812540
Gene position: 2663991-2662618 (Counterclockwise)
Preceding gene: 108812541
Following gene: 108812538
Centisome position: 58.75
GC content: 46.65
Gene sequence:
>1374_bases ATGGAACAGCAGTTACAGAACTCATCGTTAAAACGCGGTTTAAAAAATAGACATATTCAACTAATAGCTTTGGGTGGCGC AATCGGAACCGGGTTATTTCTCGGGATTGCCCAAACCATCAATATGGCCGGCCCCTCAGTAATATTGGGGTATGCAATAG GCGGGTTTATTGCTTTTCTGATTATGCGTCAATTAGGTGAAATGGTCGTCGAAGAGCCTGTTGCTGGCTCATTCAGCCAC TTTGCCTATAAGTATTGGGGCGATTTTGCTGGTTTTCTATCGGGCTGGAACTACTGGGCCATGTTTATTCTGGTCGGTAT GGCTGAATTGACTGCGGTAGGCATATATATTCAGTATTGGTGGCCTGAGATACCGACATGGGTTTCAGCAGCAGTATTCT TTATCATAATCAACGCTATCAACTTAGTTAACGTACGTCTGTATGGCGAAACGGAGTTTTGGTTTGCCATCATTAAAGTG GCTGCAATTATCGGTATGATTGTGTTCGGTGCTTATCTACTGGCATCGGGATCTGGTGGGCCAGCCGCCTCGGTGACAAA TCTCTGGGCGCAGGGGGGTTTTATGCCCCATGGCTTTCGTGGTTTGATCATGGCAATGGCGGTTATTATGTTCTCTTTTG GCGGTCTGGAGATGGTAGGGATTACTGCAGCAGAAGCCGAAGATCCACGGAACAGTATTCCTAAAGCGACTAATCAGGTC GTTTATCGCATTCTTATTTTTTATATTGGCTCACTGACGGTGCTTCTGTCTCTTTTCCCGTGGAACAATGTCGTCGAAGG GGGAAGTCCTTTCGTGATGATTTTCGATGCGTTAGATAGCCCTTGGGTGGCAACAGCATTGAATGTGGTTGTCCTGACCG CCGCCCTGTCGGTGTATAACAGTGGTGTGTATTGTAACAGTCGTATGCTTTTTGGGCTGGCATCACAGGGGAATGCGCCT AAGTTGTTGACCAAGTTAAATAAGCGTGGTGTCCCCATCCGTTCAATTGCACTTTCAGCATTAGCGACTTCAGCTGGCGT GGTGATTAACTATATTATGCCCGGCAAAGCCTTTGAATTACTTATGGCGTTGGTGGTTTCAACACTGGTAATCAACTGGG TGATGATTTGCCTGGCGCATCTGAAGTTTCGCAAGGCTAAAGTTAAAGAGGGCGTTGTGCCTCGCTTCAAAGCACTCTGG TACCCCTACGGCAATTATCTGTGCCTGGTCTTCCTCGCATTAATTCTCGTCATTATGTATCTCACCGAAGGGATTCGGAT CTCTGTGTTGATGATGCCAGTATGGATAGCGTTACTTTGGTGTGGTTTTGTACTTACTCGGCGTAAGTGTCCAAAAACGG TGACTAGCCTCTAA
Upstream 100 bases:
>100_bases GATGCTGGCGGGTTTAAGTGTTAAAAAAACCGCCGCAGACTCATTTATGAAATGCGTTGTTTATTCACACCAGTGCGTAA TCAGTGCAACAGAGGGTAGG
Downstream 100 bases:
>100_bases TGCTTCCTGATTAGCAGGGCAGTAAAATGCCGCGCTTGGAAGGGTGCGGCTTGAGCTTATATCAATAGTGATTGTTTGAT TATTGTACTTTATTGTTATT
Product: aromatic amino acid transport protein
Products: L-tryptophan [Cytoplasm]; Proton [Cytoplasm]; Proton [Cytoplasm]; L-tyrosine [Cytoplasm]; Proton [Cytoplasm]; L-phenylalanine [Cytoplasm] [C]
Alternate protein names: General aromatic amino acid permease [H]
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MEQQLQNSSLKRGLKNRHIQLIALGGAIGTGLFLGIAQTINMAGPSVILGYAIGGFIAFLIMRQLGEMVVEEPVAGSFSH FAYKYWGDFAGFLSGWNYWAMFILVGMAELTAVGIYIQYWWPEIPTWVSAAVFFIIINAINLVNVRLYGETEFWFAIIKV AAIIGMIVFGAYLLASGSGGPAASVTNLWAQGGFMPHGFRGLIMAMAVIMFSFGGLEMVGITAAEAEDPRNSIPKATNQV VYRILIFYIGSLTVLLSLFPWNNVVEGGSPFVMIFDALDSPWVATALNVVVLTAALSVYNSGVYCNSRMLFGLASQGNAP KLLTKLNKRGVPIRSIALSALATSAGVVINYIMPGKAFELLMALVVSTLVINWVMICLAHLKFRKAKVKEGVVPRFKALW YPYGNYLCLVFLALILVIMYLTEGIRISVLMMPVWIALLWCGFVLTRRKCPKTVTSL
Sequences:
>Translated_457_residues MEQQLQNSSLKRGLKNRHIQLIALGGAIGTGLFLGIAQTINMAGPSVILGYAIGGFIAFLIMRQLGEMVVEEPVAGSFSH FAYKYWGDFAGFLSGWNYWAMFILVGMAELTAVGIYIQYWWPEIPTWVSAAVFFIIINAINLVNVRLYGETEFWFAIIKV AAIIGMIVFGAYLLASGSGGPAASVTNLWAQGGFMPHGFRGLIMAMAVIMFSFGGLEMVGITAAEAEDPRNSIPKATNQV VYRILIFYIGSLTVLLSLFPWNNVVEGGSPFVMIFDALDSPWVATALNVVVLTAALSVYNSGVYCNSRMLFGLASQGNAP KLLTKLNKRGVPIRSIALSALATSAGVVINYIMPGKAFELLMALVVSTLVINWVMICLAHLKFRKAKVKEGVVPRFKALW YPYGNYLCLVFLALILVIMYLTEGIRISVLMMPVWIALLWCGFVLTRRKCPKTVTSL >Mature_457_residues MEQQLQNSSLKRGLKNRHIQLIALGGAIGTGLFLGIAQTINMAGPSVILGYAIGGFIAFLIMRQLGEMVVEEPVAGSFSH FAYKYWGDFAGFLSGWNYWAMFILVGMAELTAVGIYIQYWWPEIPTWVSAAVFFIIINAINLVNVRLYGETEFWFAIIKV AAIIGMIVFGAYLLASGSGGPAASVTNLWAQGGFMPHGFRGLIMAMAVIMFSFGGLEMVGITAAEAEDPRNSIPKATNQV VYRILIFYIGSLTVLLSLFPWNNVVEGGSPFVMIFDALDSPWVATALNVVVLTAALSVYNSGVYCNSRMLFGLASQGNAP KLLTKLNKRGVPIRSIALSALATSAGVVINYIMPGKAFELLMALVVSTLVINWVMICLAHLKFRKAKVKEGVVPRFKALW YPYGNYLCLVFLALILVIMYLTEGIRISVLMMPVWIALLWCGFVLTRRKCPKTVTSL
Specific function: Permease that is involved in the transport across the cytoplasmic membrane of the aromatic amino acids (phenylalanine, tyrosine, and tryptophan) [H]
COG id: COG1113
COG function: function code E; Gamma-aminobutyrate permease and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid transporter (AAT) (TC 2.A.3.1) family [H]
Homologues:
Organism=Homo sapiens, GI110347453, Length=355, Percent_Identity=23.3802816901408, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI258645169, Length=370, Percent_Identity=19.7297297297297, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI181337167, Length=281, Percent_Identity=24.9110320284698, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1786302, Length=456, Percent_Identity=70.3947368421053, Blast_Score=653, Evalue=0.0, Organism=Escherichia coli, GI1786789, Length=444, Percent_Identity=69.1441441441441, Blast_Score=627, Evalue=0.0, Organism=Escherichia coli, GI48994972, Length=430, Percent_Identity=41.6279069767442, Blast_Score=348, Evalue=4e-97, Organism=Escherichia coli, GI1790653, Length=456, Percent_Identity=39.2543859649123, Blast_Score=346, Evalue=2e-96, Organism=Escherichia coli, GI1786602, Length=447, Percent_Identity=43.8478747203579, Blast_Score=337, Evalue=7e-94, Organism=Escherichia coli, GI87081915, Length=390, Percent_Identity=38.4615384615385, Blast_Score=301, Evalue=7e-83, Organism=Escherichia coli, GI87081708, Length=460, Percent_Identity=34.3478260869565, Blast_Score=286, Evalue=2e-78, Organism=Escherichia coli, GI1789017, Length=437, Percent_Identity=36.1556064073227, Blast_Score=276, Evalue=2e-75, Organism=Escherichia coli, GI1788480, Length=401, Percent_Identity=35.4114713216958, Blast_Score=237, Evalue=1e-63, Organism=Escherichia coli, GI87081869, Length=173, Percent_Identity=27.1676300578035, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320772, Length=444, Percent_Identity=34.4594594594595, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6324061, Length=441, Percent_Identity=34.4671201814059, Blast_Score=226, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6322892, Length=401, Percent_Identity=33.4164588528678, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6324924, Length=447, Percent_Identity=30.8724832214765, Blast_Score=203, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6321629, Length=405, Percent_Identity=31.1111111111111, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6321053, Length=472, Percent_Identity=30.0847457627119, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6320717, Length=469, Percent_Identity=28.3582089552239, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6319824, Length=401, Percent_Identity=30.6733167082294, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6324553, Length=398, Percent_Identity=32.4120603015075, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6324059, Length=446, Percent_Identity=33.4080717488789, Blast_Score=189, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6320251, Length=475, Percent_Identity=28.4210526315789, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6324990, Length=449, Percent_Identity=30.2895322939866, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6319608, Length=450, Percent_Identity=28.8888888888889, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6322967, Length=403, Percent_Identity=30.0248138957816, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6319543, Length=402, Percent_Identity=30.0995024875622, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6319542, Length=406, Percent_Identity=27.3399014778325, Blast_Score=166, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6324981, Length=431, Percent_Identity=27.8422273781903, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6320364, Length=501, Percent_Identity=27.3453093812375, Blast_Score=124, Evalue=3e-29, Organism=Drosophila melanogaster, GI221512776, Length=286, Percent_Identity=23.0769230769231, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24666159, Length=286, Percent_Identity=23.0769230769231, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24667468, Length=362, Percent_Identity=24.0331491712707, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24668806, Length=354, Percent_Identity=23.1638418079096, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI21356285, Length=354, Percent_Identity=23.1638418079096, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24668802, Length=354, Percent_Identity=23.1638418079096, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR004840 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 50054; Mature: 50054
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS00024 HEMOPEXIN ; PS00218 AMINO_ACID_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQQLQNSSLKRGLKNRHIQLIALGGAIGTGLFLGIAQTINMAGPSVILGYAIGGFIAFL CCCHHHHHHHHCCHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IMRQLGEMVVEEPVAGSFSHFAYKYWGDFAGFLSGWNYWAMFILVGMAELTAVGIYIQYW HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEE WPEIPTWVSAAVFFIIINAINLVNVRLYGETEFWFAIIKVAAIIGMIVFGAYLLASGSGG CCCCCHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PAASVTNLWAQGGFMPHGFRGLIMAMAVIMFSFGGLEMVGITAAEAEDPRNSIPKATNQV CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHH VYRILIFYIGSLTVLLSLFPWNNVVEGGSPFVMIFDALDSPWVATALNVVVLTAALSVYN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC SGVYCNSRMLFGLASQGNAPKLLTKLNKRGVPIRSIALSALATSAGVVINYIMPGKAFEL CCCEECCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHH LMALVVSTLVINWVMICLAHLKFRKAKVKEGVVPRFKALWYPYGNYLCLVFLALILVIMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH LTEGIRISVLMMPVWIALLWCGFVLTRRKCPKTVTSL HCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure MEQQLQNSSLKRGLKNRHIQLIALGGAIGTGLFLGIAQTINMAGPSVILGYAIGGFIAFL CCCHHHHHHHHCCHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IMRQLGEMVVEEPVAGSFSHFAYKYWGDFAGFLSGWNYWAMFILVGMAELTAVGIYIQYW HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEE WPEIPTWVSAAVFFIIINAINLVNVRLYGETEFWFAIIKVAAIIGMIVFGAYLLASGSGG CCCCCHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PAASVTNLWAQGGFMPHGFRGLIMAMAVIMFSFGGLEMVGITAAEAEDPRNSIPKATNQV CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHH VYRILIFYIGSLTVLLSLFPWNNVVEGGSPFVMIFDALDSPWVATALNVVVLTAALSVYN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC SGVYCNSRMLFGLASQGNAPKLLTKLNKRGVPIRSIALSALATSAGVVINYIMPGKAFEL CCCEECCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHH LMALVVSTLVINWVMICLAHLKFRKAKVKEGVVPRFKALWYPYGNYLCLVFLALILVIMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH LTEGIRISVLMMPVWIALLWCGFVLTRRKCPKTVTSL HCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-tryptophan [Periplasm]; Proton [Periplasm]; Proton [Periplasm]; L-tyrosine [Periplasm]; Proton [Periplasm]; L-phenylalanine [Periplasm] [C]
Specific reaction: L-tryptophan [Periplasm] + Proton [Periplasm] = L-tryptophan [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] Proton [Periplasm] + L-phenylalanine [Periplasm] = Proton [Cytoplasm] +
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]