Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is yobF [C]

Identifier: 108812538

GI number: 108812538

Start: 2660596

End: 2660712

Strand: Reverse

Name: yobF [C]

Synonym: YPN_2377

Alternate gene names: 108812538

Gene position: 2660712-2660596 (Counterclockwise)

Preceding gene: 108812540

Following gene: 108812537

Centisome position: 58.68

GC content: 41.03

Gene sequence:

>117_bases
ATGTGTGGCATTTTCAGTAAAGAAGTTCTGAGTAAAGACGTTAGCGTTGAATACCGCTTCTCTGCCGATCCTTATCTTAG
TGCCTCAAGCAGTAACGACTCTAGTTTGTCTATGTAA

Upstream 100 bases:

>100_bases
CAAATATGTGCGACAGGTTCATCCTTGATTAAAAATGGCTTGCCATCGAATACAGAGTATGTGATAACGCATATGGGTAA
AACGAGGTACAGTTCTGTAT

Downstream 100 bases:

>100_bases
ACGCCTACGGGCGAGTTAAACAATCCAAAGGAAATACTCAAGATGGCAAAGATCAAAGGTCAAGTTAAGTGGTTCAACGA
GTCTAAAGGCTTCGGTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MCGIFSKEVLSKDVSVEYRFSADPYLSASSSNDSSLSM

Sequences:

>Translated_38_residues
MCGIFSKEVLSKDVSVEYRFSADPYLSASSSNDSSLSM
>Mature_38_residues
MCGIFSKEVLSKDVSVEYRFSADPYLSASSSNDSSLSM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788127, Length=38, Percent_Identity=78.9473684210526, Blast_Score=62, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4139; Mature: 4139

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGIFSKEVLSKDVSVEYRFSADPYLSASSSNDSSLSM
CCCCCCHHHCCCCCCEEEEECCCCCEECCCCCCCCCCC
>Mature Secondary Structure
MCGIFSKEVLSKDVSVEYRFSADPYLSASSSNDSSLSM
CCCCCCHHHCCCCCCEEEEECCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA