| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is yobF [C]
Identifier: 108812538
GI number: 108812538
Start: 2660596
End: 2660712
Strand: Reverse
Name: yobF [C]
Synonym: YPN_2377
Alternate gene names: 108812538
Gene position: 2660712-2660596 (Counterclockwise)
Preceding gene: 108812540
Following gene: 108812537
Centisome position: 58.68
GC content: 41.03
Gene sequence:
>117_bases ATGTGTGGCATTTTCAGTAAAGAAGTTCTGAGTAAAGACGTTAGCGTTGAATACCGCTTCTCTGCCGATCCTTATCTTAG TGCCTCAAGCAGTAACGACTCTAGTTTGTCTATGTAA
Upstream 100 bases:
>100_bases CAAATATGTGCGACAGGTTCATCCTTGATTAAAAATGGCTTGCCATCGAATACAGAGTATGTGATAACGCATATGGGTAA AACGAGGTACAGTTCTGTAT
Downstream 100 bases:
>100_bases ACGCCTACGGGCGAGTTAAACAATCCAAAGGAAATACTCAAGATGGCAAAGATCAAAGGTCAAGTTAAGTGGTTCAACGA GTCTAAAGGCTTCGGTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 38; Mature: 38
Protein sequence:
>38_residues MCGIFSKEVLSKDVSVEYRFSADPYLSASSSNDSSLSM
Sequences:
>Translated_38_residues MCGIFSKEVLSKDVSVEYRFSADPYLSASSSNDSSLSM >Mature_38_residues MCGIFSKEVLSKDVSVEYRFSADPYLSASSSNDSSLSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788127, Length=38, Percent_Identity=78.9473684210526, Blast_Score=62, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4139; Mature: 4139
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIFSKEVLSKDVSVEYRFSADPYLSASSSNDSSLSM CCCCCCHHHCCCCCCEEEEECCCCCEECCCCCCCCCCC >Mature Secondary Structure MCGIFSKEVLSKDVSVEYRFSADPYLSASSSNDSSLSM CCCCCCHHHCCCCCCEEEEECCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA