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The map label for this gene is hpaB [H]

Identifier: 108812515

GI number: 108812515

Start: 2636302

End: 2637864

Strand: Reverse

Name: hpaB [H]

Synonym: YPN_2354

Alternate gene names: 108812515

Gene position: 2637864-2636302 (Counterclockwise)

Preceding gene: 108812516

Following gene: 108812514

Centisome position: 58.17

GC content: 48.69

Gene sequence:

>1563_bases
ATGAAGCCAGAAAATTTCCGAGCGAATAACCAACGTCCTTTTACCCATAAAGAATATCTGGACAGTTTACAAGATGGCCG
AGAGATTTACATTTACGGCGAGCGAGTGAAAAACGTTACCACTCATCCGGCTTTTCGCAATGCTGCGGCGTCCATTGGCC
AGCTATATGATGCACTCCATGACCCTCAGTCCCATGAACAGCTCTGTTGGAATACTGATACGGGTAATGGCGGCTATACA
CATAAATTTTTTCGCTATGCCACTAGCCCGGCAGAGTTACGTCAGCAACGGGATGCTATTGCCCACTGGTCACGTCAGAA
TTACGGTTGGATGGGGCGCTCACCGGATTACAAGGCAGCGTTTGGCAGCGTATTGGGCGCATTTCCCGAGTTTTATGGTC
AATTTGCGGATAATGCCCGCAATTGGTATCAGCGTATCCAGGAATCCGGCCTCTATTTTAATCATGCCATCGTCAACCCG
CCCCTTGATCGCCATAAGTCCGCAGATGAAGTGAAAGATGTGTATATCCATATCGAAAAAGAGACCGATGCCGGAATTAT
TGTCAGTGGAGCCAAAGTGGTCGCCACTAACTCGGCATTAACACATTACAATTTTATCGGTTTTGGATCCGCTCAAGTGA
TGGGGGAAGACCCTGATTTTGCGCTGATGTTTGTCGCACCAATGGATGCTGACGGTATGAAGTTGATTTCCCGCGGATCT
TACGAACTGATGGTGGGCGCGACAGGCTCCCCGTTTGATTATCCGCTCTCCAGTCGATTTGATGAGAACGATGCGATTTT
AGTGATGGATAACGTACTTATCCCTTGGGAGAATATTTTAATCTACCGTGATTTTGATCGCTGCCGTCGGTGGTCTACTC
AGGGAGGATTCGCCCGGTTATTCCCACTTCAGGCTTGTACGCGTCTCGGCGTGAAACTGGACTTTATTACCGCATTGCTG
AAAAAGAGTTTAATGTGCACTGGCTCACTGGAGTTTCGTGGTGTCCAAGCGGATTTAGGTGAAGTGGTCGCTTGGCGTAA
CGTGATCTGGGCGTTAAGCGATGCCATGTGCGCCGAGGCGAAACCTTGGGTGAACGGCGCTTATCTACCCGATCTCGCAG
CATTGCAAGCCTACCGCGTCATCGCACCGATGGCATACTGCAAAATCAAGAATATCATTGAGCGTACGCTCGCCAGTGGT
CTGATTTATCTCCCCTCCAGTGTCCGTGATCTACAAAATCCGGCTATCGACAAATACCTGTCGCGTTATGTGCGGGGTTC
AAACGGTATCGACCATGTAGAACGCATTAAGGTCCTGAAATTGATGTGGGATGCGATGGGCAGTGAGTTTGGCGGCCGCC
ATGAATTATATGAAATTAACTATGCGGGCAGCCAGGATGAGATCCGTCTGCAATGTTTGCGTCAGGCGCAGGGAGACGGA
TCTATGGACCAGATGATGGCGATGGTTGATCGGTGTTTGAGTGATTATGATACTCAGGGCTGGACGGTTCCTCATCTGCA
CAATAATAACGATATTAATCAACTGAATAGGTTAATGAAATAA

Upstream 100 bases:

>100_bases
ATGAAAAAGGCACCTCCAAAAGCCATTTTCTAATGGGCTAAGGGACCCACGCCGACAAGAATGTCAGCGAGCCGGTCTTT
ATTTTGATGACGAGGTAAAT

Downstream 100 bases:

>100_bases
TCAGGTACCAGGAGGTTTATATGTCAACAGAAAATCAACATCATCTGTGTTTTCGTGACGCGATGGCCTGTTTATCGGCA
GCGGTTAATATTGTGACCAC

Product: 4-hydroxyphenylacetate 3-monooxygenase

Products: 3,4-dihydroxyphenylacetate; NAD+; H2O

Alternate protein names: 4-HPA 3-hydroxylase; 4-HPA 3-monooxygenase large component [H]

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MKPENFRANNQRPFTHKEYLDSLQDGREIYIYGERVKNVTTHPAFRNAAASIGQLYDALHDPQSHEQLCWNTDTGNGGYT
HKFFRYATSPAELRQQRDAIAHWSRQNYGWMGRSPDYKAAFGSVLGAFPEFYGQFADNARNWYQRIQESGLYFNHAIVNP
PLDRHKSADEVKDVYIHIEKETDAGIIVSGAKVVATNSALTHYNFIGFGSAQVMGEDPDFALMFVAPMDADGMKLISRGS
YELMVGATGSPFDYPLSSRFDENDAILVMDNVLIPWENILIYRDFDRCRRWSTQGGFARLFPLQACTRLGVKLDFITALL
KKSLMCTGSLEFRGVQADLGEVVAWRNVIWALSDAMCAEAKPWVNGAYLPDLAALQAYRVIAPMAYCKIKNIIERTLASG
LIYLPSSVRDLQNPAIDKYLSRYVRGSNGIDHVERIKVLKLMWDAMGSEFGGRHELYEINYAGSQDEIRLQCLRQAQGDG
SMDQMMAMVDRCLSDYDTQGWTVPHLHNNNDINQLNRLMK

Sequences:

>Translated_520_residues
MKPENFRANNQRPFTHKEYLDSLQDGREIYIYGERVKNVTTHPAFRNAAASIGQLYDALHDPQSHEQLCWNTDTGNGGYT
HKFFRYATSPAELRQQRDAIAHWSRQNYGWMGRSPDYKAAFGSVLGAFPEFYGQFADNARNWYQRIQESGLYFNHAIVNP
PLDRHKSADEVKDVYIHIEKETDAGIIVSGAKVVATNSALTHYNFIGFGSAQVMGEDPDFALMFVAPMDADGMKLISRGS
YELMVGATGSPFDYPLSSRFDENDAILVMDNVLIPWENILIYRDFDRCRRWSTQGGFARLFPLQACTRLGVKLDFITALL
KKSLMCTGSLEFRGVQADLGEVVAWRNVIWALSDAMCAEAKPWVNGAYLPDLAALQAYRVIAPMAYCKIKNIIERTLASG
LIYLPSSVRDLQNPAIDKYLSRYVRGSNGIDHVERIKVLKLMWDAMGSEFGGRHELYEINYAGSQDEIRLQCLRQAQGDG
SMDQMMAMVDRCLSDYDTQGWTVPHLHNNNDINQLNRLMK
>Mature_520_residues
MKPENFRANNQRPFTHKEYLDSLQDGREIYIYGERVKNVTTHPAFRNAAASIGQLYDALHDPQSHEQLCWNTDTGNGGYT
HKFFRYATSPAELRQQRDAIAHWSRQNYGWMGRSPDYKAAFGSVLGAFPEFYGQFADNARNWYQRIQESGLYFNHAIVNP
PLDRHKSADEVKDVYIHIEKETDAGIIVSGAKVVATNSALTHYNFIGFGSAQVMGEDPDFALMFVAPMDADGMKLISRGS
YELMVGATGSPFDYPLSSRFDENDAILVMDNVLIPWENILIYRDFDRCRRWSTQGGFARLFPLQACTRLGVKLDFITALL
KKSLMCTGSLEFRGVQADLGEVVAWRNVIWALSDAMCAEAKPWVNGAYLPDLAALQAYRVIAPMAYCKIKNIIERTLASG
LIYLPSSVRDLQNPAIDKYLSRYVRGSNGIDHVERIKVLKLMWDAMGSEFGGRHELYEINYAGSQDEIRLQCLRQAQGDG
SMDQMMAMVDRCLSDYDTQGWTVPHLHNNNDINQLNRLMK

Specific function: Utilizes FADH(2) supplied by hpaC or by another flavin reductase, to catalyze the hydroxylation of 4-hydroxyphenylacetic acid, leading to the production of 3,4-DHPA. Can also oxidize phenol to catechol, and hydroxylate other phenol derivatives [H]

COG id: COG2368

COG function: function code Q; Aromatic ring hydroxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FADH(2)-utilizing monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100
- InterPro:   IPR004925
- InterPro:   IPR012688 [H]

Pfam domain/function: PF03241 HpaB [H]

EC number: 1.14.13.3

Molecular weight: Translated: 58980; Mature: 58980

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPENFRANNQRPFTHKEYLDSLQDGREIYIYGERVKNVTTHPAFRNAAASIGQLYDALH
CCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHC
DPQSHEQLCWNTDTGNGGYTHKFFRYATSPAELRQQRDAIAHWSRQNYGWMGRSPDYKAA
CCCCCCCEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
FGSVLGAFPEFYGQFADNARNWYQRIQESGLYFNHAIVNPPLDRHKSADEVKDVYIHIEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCHHHHEEEEEEEEE
ETDAGIIVSGAKVVATNSALTHYNFIGFGSAQVMGEDPDFALMFVAPMDADGMKLISRGS
CCCCCEEEECCEEEEECCCCCEEEEEECCCCEEECCCCCEEEEEEECCCCCCHHHHHCCC
YELMVGATGSPFDYPLSSRFDENDAILVMDNVLIPWENILIYRDFDRCRRWSTQGGFARL
EEEEEECCCCCCCCCCCCCCCCCCEEEEECCEECCCCCEEEEECHHHHHCCCCCCCCEEH
FPLQACTRLGVKLDFITALLKKSLMCTGSLEFRGVQADLGEVVAWRNVIWALSDAMCAEA
HHHHHHHHHCCHHHHHHHHHHHHHEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
KPWVNGAYLPDLAALQAYRVIAPMAYCKIKNIIERTLASGLIYLPSSVRDLQNPAIDKYL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHCCHHHHHHH
SRYVRGSNGIDHVERIKVLKLMWDAMGSEFGGRHELYEINYAGSQDEIRLQCLRQAQGDG
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC
SMDQMMAMVDRCLSDYDTQGWTVPHLHNNNDINQLNRLMK
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MKPENFRANNQRPFTHKEYLDSLQDGREIYIYGERVKNVTTHPAFRNAAASIGQLYDALH
CCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHC
DPQSHEQLCWNTDTGNGGYTHKFFRYATSPAELRQQRDAIAHWSRQNYGWMGRSPDYKAA
CCCCCCCEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
FGSVLGAFPEFYGQFADNARNWYQRIQESGLYFNHAIVNPPLDRHKSADEVKDVYIHIEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCHHHHEEEEEEEEE
ETDAGIIVSGAKVVATNSALTHYNFIGFGSAQVMGEDPDFALMFVAPMDADGMKLISRGS
CCCCCEEEECCEEEEECCCCCEEEEEECCCCEEECCCCCEEEEEEECCCCCCHHHHHCCC
YELMVGATGSPFDYPLSSRFDENDAILVMDNVLIPWENILIYRDFDRCRRWSTQGGFARL
EEEEEECCCCCCCCCCCCCCCCCCEEEEECCEECCCCCEEEEECHHHHHCCCCCCCCEEH
FPLQACTRLGVKLDFITALLKKSLMCTGSLEFRGVQADLGEVVAWRNVIWALSDAMCAEA
HHHHHHHHHCCHHHHHHHHHHHHHEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
KPWVNGAYLPDLAALQAYRVIAPMAYCKIKNIIERTLASGLIYLPSSVRDLQNPAIDKYL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHCCHHHHHHH
SRYVRGSNGIDHVERIKVLKLMWDAMGSEFGGRHELYEINYAGSQDEIRLQCLRQAQGDG
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC
SMDQMMAMVDRCLSDYDTQGWTVPHLHNNNDINQLNRLMK
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-hydroxyphenylacetate; NADH; H+; O2

Specific reaction: 4-hydroxyphenylacetate + NADH + H+ + O2 = 3,4-dihydroxyphenylacetate + NAD+ + H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8077235; 8550403; 10653707 [H]