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The map label for this gene is flgC [H]

Identifier: 108812485

GI number: 108812485

Start: 2606774

End: 2607178

Strand: Reverse

Name: flgC [H]

Synonym: YPN_2324

Alternate gene names: 108812485

Gene position: 2607178-2606774 (Counterclockwise)

Preceding gene: 108812486

Following gene: 108812484

Centisome position: 57.5

GC content: 54.07

Gene sequence:

>405_bases
ATGTCTTTACTGAATATTTTTGATATTGCCGGTTCAGCATTATCAGCCCAGTCGCAACGGATGAACGTCAGTGCCAGTAA
TCTGGCCAACGCCGACAGTGTGACGGGCCCCGATGGGCAACCTTACCGCGCCAAGCAAGTGGTCTTCCAGGTGGCTGCGC
AGCCAGGGCAGGAAACCGGTGGGGTGCGGGTTGCTCAGATAGTTGATGATCCGTCACCGGATCGTTTGGTGTATCAGCCG
GGTAACCCGCTGGCGGATGCCAAAGGGTATGTGCGGATGCCGAACGTTGATGTGACGGGGGAAATGGTCAACACCATTTC
TGCATCACGTAGCTACCAGGCAAACGTTGAAGTCCTGAATACCACCAAATCCCTGATGCTCAAAACGCTGACACTGGGTC
AATAA

Upstream 100 bases:

>100_bases
CTAACTTTGCCGATAATAGCCTGAAATATCAGACCGACCTGACCATTCTTGGCGGCCAGATTAAAGGGATGATGTCAGTG
TTACAACAAGGATAAGACAC

Downstream 100 bases:

>100_bases
CAGGAGCCAGCATAATGGCCATTACCAATTCCCTGACGGAAAGTGATTACGGCACGACCGGGACCAGTTCCACTACCGGC
AGCAGTAGTCAAGATCTGCA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSLLNIFDIAGSALSAQSQRMNVSASNLANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVRVAQIVDDPSPDRLVYQP
GNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLTLGQ

Sequences:

>Translated_134_residues
MSLLNIFDIAGSALSAQSQRMNVSASNLANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVRVAQIVDDPSPDRLVYQP
GNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLTLGQ
>Mature_133_residues
SLLNIFDIAGSALSAQSQRMNVSASNLANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVRVAQIVDDPSPDRLVYQPG
NPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLTLGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=134, Percent_Identity=82.8358208955224, Blast_Score=233, Evalue=2e-63,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14196; Mature: 14065

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLNIFDIAGSALSAQSQRMNVSASNLANADSVTGPDGQPYRAKQVVFQVAAQPGQETG
CCCCHHHHHCCCHHCCCCHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
GVRVAQIVDDPSPDRLVYQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLN
CEEEEEEECCCCCCEEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCEEEEH
TTKSLMLKTLTLGQ
HHHHHHHHHHCCCC
>Mature Secondary Structure 
SLLNIFDIAGSALSAQSQRMNVSASNLANADSVTGPDGQPYRAKQVVFQVAAQPGQETG
CCCHHHHHCCCHHCCCCHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
GVRVAQIVDDPSPDRLVYQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLN
CEEEEEEECCCCCCEEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCEEEEH
TTKSLMLKTLTLGQ
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA