Click here to switch to the map view.

The map label for this gene is flgE [H]

Identifier: 108812483

GI number: 108812483

Start: 2604594

End: 2605880

Strand: Reverse

Name: flgE [H]

Synonym: YPN_2322

Alternate gene names: 108812483

Gene position: 2605880-2604594 (Counterclockwise)

Preceding gene: 108812484

Following gene: 108812482

Centisome position: 57.47

GC content: 50.82

Gene sequence:

>1287_bases
ATGGGCTTTTCTCAAGCAGTTAGCGGTATGAACGCAGCATCCAGTAATCTAGATGTGATCGGTAACAATATCGCCAACTC
GGCAACCTCAGGTTTTAAAGCAGGTTCAGTTTCTTTCGCTGATATGTTTGCGGGTTCTCAGACCGGCATGGGCGTAAAGG
TCGCGGGGATTACTCAAGATTTTAATGACGGTACGGCCACCACCACTAATCGTCGTTTGGATCTGGCTATCAGCCAGAAC
GGTTTTTTCCGTATGCAAGACAGCAGCGGCGGCATTTACTATGCCCGTAACGGCCAGTTTAAGCTGGATGAAAACCGTAA
TATCGTCAATATGCAAGGTCTAAATCTAACGGGTTACCCGGCAACAGGGACACCACCAACGGTACAACAGGGCGCTAACC
CGGTCCCCCTGTCTATTCCGCAGGATATGATCTCCGCCAAGGCGACGACCTCCGGCAATATGGTGGCCAACCTGACCTCT
ACCCATGATGTTATCGCGGAAGCGACCTCACCTTTTGATCCCGATAACCCAGATACCTACAGCTTTGTCAATAACATGAC
GACCTTTGATAGCTTGGGTAACCGCCATGAAATCAATGTCTTTTATGTTAAACGTGCTGAAGATGCGACCGATGGGAATA
CTTGGGACGTCTACACCAGGGACAGTAGCGCCAAAGTGACCGACCCAGCAGACCCGACCGATCCTGCTGCTGCCGCTAAA
CGTGGTTCGATGGTTTTTGATAGTAACGGTGCCCTGAAAAACGTGACAAACGGTACAAATGCAACCAGTACCACAGACTT
CACGTTTACGATCCCGATGGGCGTGGTTAATGGTGCGCCCGCACAAAGTTTCGCACTGAATGTTGCGGGCAGTAAACAGC
AAAATACCGGTGCTGACAGCATTGTTGCACAGAACCAGACTGGCTACGCCGCCGGTGAATTTACTGGCTTCCAGATCAAC
AGTGATGGTTCTGTGGTAGGGACTTATTCCAACCAGCAGACCCAATTGCTCGGCCAAATCGTCATGGTTAACTTCTCTAA
CCCAGAAGGGCTGTCCTCCGAAGGCGATAACGTGTGGAAAGAGACGCAGTCTTCCGGTAACCCGACGCTCGGGACTGCCG
GTAGCGGTGGCTTCGGCACGTTGACCAGTGGTGCGCTGGAATCCTCTAACGTGGATTTGAGTAAAGAGTTGGTGAACATG
ATTGTGGCGCAACGTAACTATCAGTCCAACGCGCAGACCATCAAAACCCAAGATCAGATCTTACAAACTCTGGTTAGCCT
GCGTTAA

Upstream 100 bases:

>100_bases
CACGTTAGTGAATGAACTGACCTTCATTATCAAAAACAGCGTTTGATATGTCATCAGCGCCTAAGGTCTGTAACAGACCC
CGAATTTAACGGAGAAGAAA

Downstream 100 bases:

>100_bases
TCGTACTGACGGGAAGAGCTCATGGATCACGCAATATATACCGCAATGGGGGCTGCCCGGCAGTCTCTGGAGTTGCAGGC
CGTTACCGCCAACAATTTGG

Product: flagellar hook protein FlgE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MGFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQDFNDGTATTTNRRLDLAISQN
GFFRMQDSSGGIYYARNGQFKLDENRNIVNMQGLNLTGYPATGTPPTVQQGANPVPLSIPQDMISAKATTSGNMVANLTS
THDVIAEATSPFDPDNPDTYSFVNNMTTFDSLGNRHEINVFYVKRAEDATDGNTWDVYTRDSSAKVTDPADPTDPAAAAK
RGSMVFDSNGALKNVTNGTNATSTTDFTFTIPMGVVNGAPAQSFALNVAGSKQQNTGADSIVAQNQTGYAAGEFTGFQIN
SDGSVVGTYSNQQTQLLGQIVMVNFSNPEGLSSEGDNVWKETQSSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNM
IVAQRNYQSNAQTIKTQDQILQTLVSLR

Sequences:

>Translated_428_residues
MGFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQDFNDGTATTTNRRLDLAISQN
GFFRMQDSSGGIYYARNGQFKLDENRNIVNMQGLNLTGYPATGTPPTVQQGANPVPLSIPQDMISAKATTSGNMVANLTS
THDVIAEATSPFDPDNPDTYSFVNNMTTFDSLGNRHEINVFYVKRAEDATDGNTWDVYTRDSSAKVTDPADPTDPAAAAK
RGSMVFDSNGALKNVTNGTNATSTTDFTFTIPMGVVNGAPAQSFALNVAGSKQQNTGADSIVAQNQTGYAAGEFTGFQIN
SDGSVVGTYSNQQTQLLGQIVMVNFSNPEGLSSEGDNVWKETQSSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNM
IVAQRNYQSNAQTIKTQDQILQTLVSLR
>Mature_427_residues
GFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQDFNDGTATTTNRRLDLAISQNG
FFRMQDSSGGIYYARNGQFKLDENRNIVNMQGLNLTGYPATGTPPTVQQGANPVPLSIPQDMISAKATTSGNMVANLTST
HDVIAEATSPFDPDNPDTYSFVNNMTTFDSLGNRHEINVFYVKRAEDATDGNTWDVYTRDSSAKVTDPADPTDPAAAAKR
GSMVFDSNGALKNVTNGTNATSTTDFTFTIPMGVVNGAPAQSFALNVAGSKQQNTGADSIVAQNQTGYAAGEFTGFQINS
DGSVVGTYSNQQTQLLGQIVMVNFSNPEGLSSEGDNVWKETQSSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNMI
VAQRNYQSNAQTIKTQDQILQTLVSLR

Specific function: Unknown

COG id: COG1749

COG function: function code N; Flagellar hook protein FlgE

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787316, Length=429, Percent_Identity=61.0722610722611, Blast_Score=499, Evalue=1e-142,
Organism=Escherichia coli, GI1787318, Length=110, Percent_Identity=44.5454545454545, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR011491
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013 [H]

Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 44876; Mature: 44744

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQD
CCHHHHHCCCCCCCCCCEEECCCHHCCCCCCCCCCCEEHHHHHCCCCCCCCEEEEEECCC
FNDGTATTTNRRLDLAISQNGFFRMQDSSGGIYYARNGQFKLDENRNIVNMQGLNLTGYP
CCCCCCEECCCEEEEEECCCCEEEEEECCCCEEEEECCCEEECCCCCEEEECCCEEECCC
ATGTPPTVQQGANPVPLSIPQDMISAKATTSGNMVANLTSTHDVIAEATSPFDPDNPDTY
CCCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCHH
SFVNNMTTFDSLGNRHEINVFYVKRAEDATDGNTWDVYTRDSSAKVTDPADPTDPAAAAK
HHHHCCHHHHHCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCEECCCCCCCCHHHHHH
RGSMVFDSNGALKNVTNGTNATSTTDFTFTIPMGVVNGAPAQSFALNVAGSKQQNTGADS
CCCEEECCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCC
IVAQNQTGYAAGEFTGFQINSDGSVVGTYSNQQTQLLGQIVMVNFSNPEGLSSEGDNVWK
EEEECCCCCCCCCEEEEEECCCCCEEEECCCHHHHEEEEEEEEEECCCCCCCCCCCHHHH
ETQSSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI
HHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LQTLVSLR
HHHHHHCC
>Mature Secondary Structure 
GFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQD
CHHHHHCCCCCCCCCCEEECCCHHCCCCCCCCCCCEEHHHHHCCCCCCCCEEEEEECCC
FNDGTATTTNRRLDLAISQNGFFRMQDSSGGIYYARNGQFKLDENRNIVNMQGLNLTGYP
CCCCCCEECCCEEEEEECCCCEEEEEECCCCEEEEECCCEEECCCCCEEEECCCEEECCC
ATGTPPTVQQGANPVPLSIPQDMISAKATTSGNMVANLTSTHDVIAEATSPFDPDNPDTY
CCCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCHH
SFVNNMTTFDSLGNRHEINVFYVKRAEDATDGNTWDVYTRDSSAKVTDPADPTDPAAAAK
HHHHCCHHHHHCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCEECCCCCCCCHHHHHH
RGSMVFDSNGALKNVTNGTNATSTTDFTFTIPMGVVNGAPAQSFALNVAGSKQQNTGADS
CCCEEECCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCC
IVAQNQTGYAAGEFTGFQINSDGSVVGTYSNQQTQLLGQIVMVNFSNPEGLSSEGDNVWK
EEEECCCCCCCCCEEEEEECCCCCEEEECCCHHHHEEEEEEEEEECCCCCCCCCCCHHHH
ETQSSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI
HHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LQTLVSLR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]