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The map label for this gene is fliC [H]

Identifier: 108812442

GI number: 108812442

Start: 2564184

End: 2565293

Strand: Reverse

Name: fliC [H]

Synonym: YPN_2281

Alternate gene names: 108812442

Gene position: 2565293-2564184 (Counterclockwise)

Preceding gene: 108812447

Following gene: 108812441

Centisome position: 56.57

GC content: 46.85

Gene sequence:

>1110_bases
ATGGCGGTAATTAACACAAACAGCTTGTCCCTGCTGACTCAGAACAACCTGAATAAATCTCAGTCTTCTTTAGGCACCGC
CATTGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGTGCAAAAGACGATGCCGCTGGTCAGGCGATTGCTAACCGTTTCA
CCTCTAACATCAAAGGCCTGACTCAGGCTGCACGTAACGCCAACGACGGTATCTCTATCGCTCAGACTACTGAAGGTTCT
CTGAACGAAATCAACAACAACTTGCAGCGTGTACGTGAACTGACTGTACAGGCGCAAAACGGTTCGAACTCAAGTTCTGA
CCTGGACTCTATTCAGGATGAAATCAGCCTGCGTTTGGCTGAAATTGACCGTGTATCTGATCAGACCCAATTCAACGGTA
AAAAAGTCCTGGCTGAAAACACCACGATGTCGATTCAGGTTGGTGCAAATGATGGCGAGACCATTGATATCAACCTGCAA
AAAATCGACTCTAAGAGCCTGGGCTTAGGTAGCTACTCTGTTAGCGGTGTATCTGGTGCATTAACCTCATTAACTGATAC
ATCAGTAACAGGTGTAACTACCACGACCGCGCTTGATTTTAGCGACATTAGCACTTTTGCTAAAGGTGCCACAGTACATG
GTATTGGGGACGTTGGCACAGATGGCGCTTATGCAGACGGTTATGTTATCCGTACTACTGACGGTAAACAATATAAAGGT
GAAGTGGATGCTACTAATGGAAAAGTAACATTTGCAGATGATGCTAATGGCGATCCAATTGATGACGCTACCAAGCTGGA
AGCAGCGGCTCAGTTTAGTCCTGCTGGCAAAGCAACGGCTTCACCATTGGAGACTTTGGATGATGCTATCAAACAAGTTG
ATGGCCTTCGTAGTTCACTGGGTGCGGTACAAAACCGTTTCGAATCTGCGGTAACCAACCTGAATAACACCGTGACTAAC
CTGACTTCTGCCCGTAGCCGTATCGAAGATGCTGATTATGCGACTGAAGTGTCTAACATGAGCCGTGCTCAGATCCTGCA
ACAAGCAGGGACTTCTGTGTTGTCTCAAGCTAACCAGGTTCCACAGACTGTTCTGTCTCTGCTGAATTAA

Upstream 100 bases:

>100_bases
CTAAAGGTTCCTTAAAGAGCGCCGATACAAGTTGTGACGGTGATGAAGCCGTGGGCAGTAAGCCCAAATCATAACCCAAC
AGCATTTAAGGAATAATACT

Downstream 100 bases:

>100_bases
TTCGACGGCACTCATACCCTTATTCCAACCCTGCTGCGGCGGGGTTTTTACCTCAGTTTGTTTGAGATTGTCGTGGTATT
AGCGGCTTTCACACCGATGG

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEGS
LNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISLRLAEIDRVSDQTQFNGKKVLAENTTMSIQVGANDGETIDINLQ
KIDSKSLGLGSYSVSGVSGALTSLTDTSVTGVTTTTALDFSDISTFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKG
EVDATNGKVTFADDANGDPIDDATKLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSLGAVQNRFESAVTNLNNTVTN
LTSARSRIEDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLLN

Sequences:

>Translated_369_residues
MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEGS
LNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISLRLAEIDRVSDQTQFNGKKVLAENTTMSIQVGANDGETIDINLQ
KIDSKSLGLGSYSVSGVSGALTSLTDTSVTGVTTTTALDFSDISTFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKG
EVDATNGKVTFADDANGDPIDDATKLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSLGAVQNRFESAVTNLNNTVTN
LTSARSRIEDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLLN
>Mature_368_residues
AVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEGSL
NEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISLRLAEIDRVSDQTQFNGKKVLAENTTMSIQVGANDGETIDINLQK
IDSKSLGLGSYSVSGVSGALTSLTDTSVTGVTTTTALDFSDISTFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKGE
VDATNGKVTFADDANGDPIDDATKLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSLGAVQNRFESAVTNLNNTVTNL
TSARSRIEDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLLN

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=258, Percent_Identity=62.7906976744186, Blast_Score=277, Evalue=8e-76,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 38593; Mature: 38461

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGL
CEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHH
TQAARNANDGISIAQTTEGSLNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISLRLA
HHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHH
EIDRVSDQTQFNGKKVLAENTTMSIQVGANDGETIDINLQKIDSKSLGLGSYSVSGVSGA
HHHHHCCCHHCCCCEEEECCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHH
LTSLTDTSVTGVTTTTALDFSDISTFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKG
HHHHCCCCCCCEEEEEEECHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCC
EVDATNGKVTFADDANGDPIDDATKLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSL
CEECCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GAVQNRFESAVTNLNNTVTNLTSARSRIEDADYATEVSNMSRAQILQQAGTSVLSQANQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PQTVLSLLN
HHHHHHHHC
>Mature Secondary Structure 
AVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGL
EEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHH
TQAARNANDGISIAQTTEGSLNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISLRLA
HHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHH
EIDRVSDQTQFNGKKVLAENTTMSIQVGANDGETIDINLQKIDSKSLGLGSYSVSGVSGA
HHHHHCCCHHCCCCEEEECCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHH
LTSLTDTSVTGVTTTTALDFSDISTFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKG
HHHHCCCCCCCEEEEEEECHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCC
EVDATNGKVTFADDANGDPIDDATKLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSL
CEECCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GAVQNRFESAVTNLNNTVTNLTSARSRIEDADYATEVSNMSRAQILQQAGTSVLSQANQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PQTVLSLLN
HHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2673930 [H]