Click here to switch to the map view.

The map label for this gene is 108812402

Identifier: 108812402

GI number: 108812402

Start: 2526710

End: 2527570

Strand: Reverse

Name: 108812402

Synonym: YPN_2241

Alternate gene names: NA

Gene position: 2527570-2526710 (Counterclockwise)

Preceding gene: 108812403

Following gene: 108812401

Centisome position: 55.74

GC content: 49.25

Gene sequence:

>861_bases
ATGGACGAAAAGAAACTTAAAGCACTTGCGGCTGAACTGGCTAAAGGTCTTAAAACCGAAGCCGACCTTAATGTATTTTC
TCGTATGCTGACAAAGCTTACCGTCGAAACAGCGTTAAATGCCGAGCTTACCGAACACCTCGGGCACGAGAAAAATACCC
CCAAAACAGGCTCAAATACTCGCAATGGTTACTCGTCTAAAACGTTGCTGTGCGACGATGGCGAGATTGAACTCAGCACG
CCCCGTGACAGTGAAAACACCTTCGAGCCTAAGCTAATAAAGAAAAACCAGACGCGCATCACGCAGATGGACAGCCAGAT
TTTATCCCTGTACGCCAAAGGCATGACCACGCGGGAAATCGTCGCCACCTTCAAGGAGATGTACGACGCTGACGTGTCGC
CCACATTGATATCTAAAGTCACCGATGCGGTCAAAGAGCAGGTCACTGAGTGGCAAAATCGCCCTCTGGATGCGCTGTAC
CCCATTGTTTATCTTGATTGCATTGTGGTAAAAGTTCGTCACAACGGCAGTGTAATTAACAAAGCCGTGTTCCTCGCGTT
GGGCATTAATACCGAAGGCCAAAAGGAGCTATTGGGCATGTGGCTGGCCGAAAACGAAGGCGCGAAATTCTGGCTAAGTG
TGCTGACAGAGCTTAAAAACCGGGGTCTGCAGGATATCCTGATTGCTTGTGTGGACGGTCTGAAAGGCTTCCCGGATGCG
ATAAACAGCGTTTATCCGCAGACGCATATCCAGCTCTGCATCATCCATATGGTACGCAACAGCCTGAAATATGTGTCATG
GAAGGACTATAAAGCCGTCACCAGCGGTTTGAAAATGGTGTATCAGGCTCCGACACGCTGA

Upstream 100 bases:

>100_bases
CAATAACGAGTGGGAAGGAAATATTTATCGAGACTGTAAACAAGATTGTGTAATTGCCTGTTTTTGATATCTTCACTCCA
ACAACGGAGACAGGCAAATT

Downstream 100 bases:

>100_bases
TGGCGCTGGATAAGTTTGCGGAGGCCTGGGACGACAAATACCCAAAAATTAGCAAAATTTGGCGTACGCACTGGGAAAAT
CTCAATACATTCTTCGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MDEKKLKALAAELAKGLKTEADLNVFSRMLTKLTVETALNAELTEHLGHEKNTPKTGSNTRNGYSSKTLLCDDGEIELST
PRDSENTFEPKLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVTEWQNRPLDALY
PIVYLDCIVVKVRHNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDA
INSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTR

Sequences:

>Translated_286_residues
MDEKKLKALAAELAKGLKTEADLNVFSRMLTKLTVETALNAELTEHLGHEKNTPKTGSNTRNGYSSKTLLCDDGEIELST
PRDSENTFEPKLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVTEWQNRPLDALY
PIVYLDCIVVKVRHNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDA
INSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTR
>Mature_286_residues
MDEKKLKALAAELAKGLKTEADLNVFSRMLTKLTVETALNAELTEHLGHEKNTPKTGSNTRNGYSSKTLLCDDGEIELST
PRDSENTFEPKLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVTEWQNRPLDALY
PIVYLDCIVVKVRHNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDA
INSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTR

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 32070; Mature: 32070

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKKLKALAAELAKGLKTEADLNVFSRMLTKLTVETALNAELTEHLGHEKNTPKTGSNT
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RNGYSSKTLLCDDGEIELSTPRDSENTFEPKLIKKNQTRITQMDSQILSLYAKGMTTREI
CCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHH
VATFKEMYDADVSPTLISKVTDAVKEQVTEWQNRPLDALYPIVYLDCIVVKVRHNGSVIN
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCHHH
KAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDA
HHEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH
INSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTR
HHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDEKKLKALAAELAKGLKTEADLNVFSRMLTKLTVETALNAELTEHLGHEKNTPKTGSNT
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RNGYSSKTLLCDDGEIELSTPRDSENTFEPKLIKKNQTRITQMDSQILSLYAKGMTTREI
CCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHH
VATFKEMYDADVSPTLISKVTDAVKEQVTEWQNRPLDALYPIVYLDCIVVKVRHNGSVIN
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCHHH
KAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDA
HHEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH
INSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTR
HHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]