Click here to switch to the map view.

The map label for this gene is 108812403

Identifier: 108812403

GI number: 108812403

Start: 2527618

End: 2528694

Strand: Reverse

Name: 108812403

Synonym: YPN_2242

Alternate gene names: NA

Gene position: 2528694-2527618 (Counterclockwise)

Preceding gene: 108812404

Following gene: 108812402

Centisome position: 55.76

GC content: 36.86

Gene sequence:

>1077_bases
ATGGCAAGCTGCATCCCCCCAAAGGTTCCCGGATACTTACAAAGAATTCGGGAACAATATAAGGAAAGTGAACCTGTTAT
TTATAAAGTTCTTAGCCATGCAAAAGTATTTGTTCGCGAAGATTACCATACAGATCATAATTATGATGCTGTTGGTCATG
ATATCTGTCTTTTCTTGCCAATGGAGATATTGATAGATATACATATTTCTAAACAGGAAGCATATACAAATTTAATTAAA
AACGACCTCAATATTTTGACAAGATCTGTGCATGATGAATGGATAGGTGAAGTTGCATTAGAACTGAATTCTGAGATAGA
TCCTGAATATCAACAAGCTATCAGTATCAATGAAATAGTCAACGAGGTGCTGAATCCTGATGAGTTATCCATCTGGAAGC
CAAATTTAATTCGAGTTTTTATTAGCCATAGAGACAAATATAAGCGTGAAGCACAAGAATTAGCTAACTCCTTAGAGGAG
TACGGCTTCAGTTGTTTTGTTGCCCATGAGACTATCGAACCACTCAAAGAGTGGAGAAATGAGATCGTTAACGGGCTGAA
AACAATGGAAGTGATGCTGGTTTTACTAACGGATGATTTCAATGACAGTATCTGGACGTGCCAAGAGGTTGGCTATGCTC
TCGGTGCAAATAAACCAGTTGTAACCCTAAAAGTTGGCAAGGTCGATCCCGCTGGTTTTATCAGTCATTTACAAGCGGTT
AAAGGGAGCCTCGATAATCCTACGCATAATGCCGAGTTGTTAAATATGCTCTTAGCTGAAAGCATTGGTAAAGCATCAAG
AATACAACAAGCACTAATTTCTACATTTATAGCATCTCAGAGTTTTGATGAAGCCAAACATCGATTCAATCGTATGAATA
AGAGCATCAAAAAACTTACGGAAGAAAATTTAAATACCGTAATGGATGGATTTCGAAGAAATAATCAGTTGAATCAGTGC
ATGTATCTAAATAATAACTACAACAGACTTAAAACTTTTATTGAACGGACAACAGGAAAAAGCGCAATAACGAGTGGGAA
GGAAATATTTATCGAGACTGTAAACAAGATTGTGTAA

Upstream 100 bases:

>100_bases
TGCGCGATTATGCTAAAACACATGGGATGCTGTGATTTATTAGGCGTTATTTTCAATAACCAATCAAAGCTCACTCAAAG
AAGCCACTAAGAGGGACATT

Downstream 100 bases:

>100_bases
TTGCCTGTTTTTGATATCTTCACTCCAACAACGGAGACAGGCAAATTATGGACGAAAAGAAACTTAAAGCACTTGCGGCT
GAACTGGCTAAAGGTCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MASCIPPKVPGYLQRIREQYKESEPVIYKVLSHAKVFVREDYHTDHNYDAVGHDICLFLPMEILIDIHISKQEAYTNLIK
NDLNILTRSVHDEWIGEVALELNSEIDPEYQQAISINEIVNEVLNPDELSIWKPNLIRVFISHRDKYKREAQELANSLEE
YGFSCFVAHETIEPLKEWRNEIVNGLKTMEVMLVLLTDDFNDSIWTCQEVGYALGANKPVVTLKVGKVDPAGFISHLQAV
KGSLDNPTHNAELLNMLLAESIGKASRIQQALISTFIASQSFDEAKHRFNRMNKSIKKLTEENLNTVMDGFRRNNQLNQC
MYLNNNYNRLKTFIERTTGKSAITSGKEIFIETVNKIV

Sequences:

>Translated_358_residues
MASCIPPKVPGYLQRIREQYKESEPVIYKVLSHAKVFVREDYHTDHNYDAVGHDICLFLPMEILIDIHISKQEAYTNLIK
NDLNILTRSVHDEWIGEVALELNSEIDPEYQQAISINEIVNEVLNPDELSIWKPNLIRVFISHRDKYKREAQELANSLEE
YGFSCFVAHETIEPLKEWRNEIVNGLKTMEVMLVLLTDDFNDSIWTCQEVGYALGANKPVVTLKVGKVDPAGFISHLQAV
KGSLDNPTHNAELLNMLLAESIGKASRIQQALISTFIASQSFDEAKHRFNRMNKSIKKLTEENLNTVMDGFRRNNQLNQC
MYLNNNYNRLKTFIERTTGKSAITSGKEIFIETVNKIV
>Mature_357_residues
ASCIPPKVPGYLQRIREQYKESEPVIYKVLSHAKVFVREDYHTDHNYDAVGHDICLFLPMEILIDIHISKQEAYTNLIKN
DLNILTRSVHDEWIGEVALELNSEIDPEYQQAISINEIVNEVLNPDELSIWKPNLIRVFISHRDKYKREAQELANSLEEY
GFSCFVAHETIEPLKEWRNEIVNGLKTMEVMLVLLTDDFNDSIWTCQEVGYALGANKPVVTLKVGKVDPAGFISHLQAVK
GSLDNPTHNAELLNMLLAESIGKASRIQQALISTFIASQSFDEAKHRFNRMNKSIKKLTEENLNTVMDGFRRNNQLNQCM
YLNNNYNRLKTFIERTTGKSAITSGKEIFIETVNKIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41058; Mature: 40927

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASCIPPKVPGYLQRIREQYKESEPVIYKVLSHAKVFVREDYHTDHNYDAVGHDICLFLP
CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
MEILIDIHISKQEAYTNLIKNDLNILTRSVHDEWIGEVALELNSEIDPEYQQAISINEIV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
NEVLNPDELSIWKPNLIRVFISHRDKYKREAQELANSLEEYGFSCFVAHETIEPLKEWRN
HHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH
EIVNGLKTMEVMLVLLTDDFNDSIWTCQEVGYALGANKPVVTLKVGKVDPAGFISHLQAV
HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH
KGSLDNPTHNAELLNMLLAESIGKASRIQQALISTFIASQSFDEAKHRFNRMNKSIKKLT
HCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EENLNTVMDGFRRNNQLNQCMYLNNNYNRLKTFIERTTGKSAITSGKEIFIETVNKIV
HHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
ASCIPPKVPGYLQRIREQYKESEPVIYKVLSHAKVFVREDYHTDHNYDAVGHDICLFLP
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
MEILIDIHISKQEAYTNLIKNDLNILTRSVHDEWIGEVALELNSEIDPEYQQAISINEIV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
NEVLNPDELSIWKPNLIRVFISHRDKYKREAQELANSLEEYGFSCFVAHETIEPLKEWRN
HHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH
EIVNGLKTMEVMLVLLTDDFNDSIWTCQEVGYALGANKPVVTLKVGKVDPAGFISHLQAV
HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH
KGSLDNPTHNAELLNMLLAESIGKASRIQQALISTFIASQSFDEAKHRFNRMNKSIKKLT
HCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EENLNTVMDGFRRNNQLNQCMYLNNNYNRLKTFIERTTGKSAITSGKEIFIETVNKIV
HHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA