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The map label for this gene is cvpA [H]

Identifier: 108812338

GI number: 108812338

Start: 2459940

End: 2460449

Strand: Reverse

Name: cvpA [H]

Synonym: YPN_2176

Alternate gene names: 108812338

Gene position: 2460449-2459940 (Counterclockwise)

Preceding gene: 108812339

Following gene: 108812337

Centisome position: 54.26

GC content: 44.71

Gene sequence:

>510_bases
ATGGTCTGGATTGATTACGTCATTATAGGAATTATCGGGTTTTCTGCGTTAGTCAGTTTAATTCGAGGGTTTGTCCGTGA
AGCATTGTCACTTGTAACATGGGGATGTGCGTTTTTTGTTGCCAGCCATTTTTACACTTACCTTGCTGTTTATTTCACCC
GATTTGAGGATGAAATTGTTCGCAACGGAATTGCCATCGGCATTTTGTTCATCGCGACATTGATCGTCGGGGCGATTGTC
AACTATGTGATTAGTTCACTGGTGGAGCGTACTGGGTTATCAGGAACCGATAGGGTGTTAGGGGTCTGTTTTGGGGCACT
GCGAGGTGTACTGATTGTCTCTGCCATGTTGTTCTTTCTGGATACGTTTACCGGCTTCTCACAGAGTGTTGATTGGAAGC
AGTCACAATTAATCCCGCAGTTCAGTTATATCATCAGGTGGTTCTTTGACTACCTGCAGAGCACGTCGAGTTTCTTACCG
AATCAATTACCGATTCGAAGCGGCTTATGA

Upstream 100 bases:

>100_bases
AATTTGTTTTGGGGTTAGAAACCCCTACGCAAACGTTTTCTTTTTCTGTTAGAATTCGCCGCGAACAAGATGCAGCGGCG
GTTTCGTTATTGGAATAGTC

Downstream 100 bases:

>100_bases
GGAAAAGACAACATGTGCGGTATTGTCGGTATCGCCGGTTTTACACCGGTAAACCAGTCGATTTATGATGCGTTGATGGT
GCTTCAGCATCGGGGTCAGG

Product: colicin V production protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MVWIDYVIIGIIGFSALVSLIRGFVREALSLVTWGCAFFVASHFYTYLAVYFTRFEDEIVRNGIAIGILFIATLIVGAIV
NYVISSLVERTGLSGTDRVLGVCFGALRGVLIVSAMLFFLDTFTGFSQSVDWKQSQLIPQFSYIIRWFFDYLQSTSSFLP
NQLPIRSGL

Sequences:

>Translated_169_residues
MVWIDYVIIGIIGFSALVSLIRGFVREALSLVTWGCAFFVASHFYTYLAVYFTRFEDEIVRNGIAIGILFIATLIVGAIV
NYVISSLVERTGLSGTDRVLGVCFGALRGVLIVSAMLFFLDTFTGFSQSVDWKQSQLIPQFSYIIRWFFDYLQSTSSFLP
NQLPIRSGL
>Mature_169_residues
MVWIDYVIIGIIGFSALVSLIRGFVREALSLVTWGCAFFVASHFYTYLAVYFTRFEDEIVRNGIAIGILFIATLIVGAIV
NYVISSLVERTGLSGTDRVLGVCFGALRGVLIVSAMLFFLDTFTGFSQSVDWKQSQLIPQFSYIIRWFFDYLQSTSSFLP
NQLPIRSGL

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=161, Percent_Identity=82.6086956521739, Blast_Score=270, Evalue=4e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 18954; Mature: 18954

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWIDYVIIGIIGFSALVSLIRGFVREALSLVTWGCAFFVASHFYTYLAVYFTRFEDEIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGIAIGILFIATLIVGAIVNYVISSLVERTGLSGTDRVLGVCFGALRGVLIVSAMLFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DTFTGFSQSVDWKQSQLIPQFSYIIRWFFDYLQSTSSFLPNQLPIRSGL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVWIDYVIIGIIGFSALVSLIRGFVREALSLVTWGCAFFVASHFYTYLAVYFTRFEDEIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGIAIGILFIATLIVGAIVNYVISSLVERTGLSGTDRVLGVCFGALRGVLIVSAMLFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DTFTGFSQSVDWKQSQLIPQFSYIIRWFFDYLQSTSSFLPNQLPIRSGL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]