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The map label for this gene is dedD [H]

Identifier: 108812339

GI number: 108812339

Start: 2460761

End: 2461483

Strand: Reverse

Name: dedD [H]

Synonym: YPN_2177

Alternate gene names: 108812339

Gene position: 2461483-2460761 (Counterclockwise)

Preceding gene: 108812340

Following gene: 108812338

Centisome position: 54.28

GC content: 51.31

Gene sequence:

>723_bases
GTGGCAAGTCAGTTCCAGAACCGTTTAGTCGGGACCATTATTTTAGTTGCCTTAGGTGTGATTGTGTTACCGGGGCTACT
GGATGGCAAAAAGAAGCACTATGAGGATGAGTTTGCTGCTATTCCGTTAGTGCCAAAACCAGGGGATAGCCAAGAGATTG
ATGTGGTTCCGCCGCTCAATCAGCCTCTTCCCATTACGCCGCCCGAAGGTGCAGCACAAGCGGTAGGCGCCGAACTCAAC
GATGATTCGGTTTCTCAGGCGGCTAATGATGCCGGCAATCTTGCCGTTGAACCTACGATTGTGGCACCGCCACCAATCCA
GAGTAAGCCGGTTGAGGTAAAACCTACCGTGACGAAGCCGGTAGACGTTAAGCCGACAGAAACCAAGCCGATAGAAACAA
AACCAGCAGAGAAAAAACCGCTGGAAGTGAAACCTAAGCCAGAAATCAAACCGCCGGTGGAAGAAAAAGCGCCAGTGGGG
CAGGCTTATGTTGTCCAACTGGGGGCGCTAAAAAATGCAGCCAAAGTAAATGAGATTGTCGCGATGCTGCGGTTGTCGGG
GCATCGGGCGTTCACTGTACCCGCCACGCCGGTTCAGGGTGAGATAACCCGGTTATATGTCGGGCCGGATGCATCAAAAC
AGAAATTACAATCCGCGTTACCTGAGCTTAATGCATTAAGTGGTCTGAATGGGCAAGTTAAGCCTTATACAACGTCGCGT
TAG

Upstream 100 bases:

>100_bases
GATTGAATTTAAACCCAAAGAGCATGGAGTTGCAGGCGGGCAGTAAACGATCGCTTCCTGCATCTTCAAGTCCGGCGGGA
GATAAACGCGGGGAGTGCGA

Downstream 100 bases:

>100_bases
GGTGACTACTGTCCTAGATTGTACTGTCTTAAATTGTACTGTCTTAAATTGTTACTGTCTTAGGTTGCCGACTGCGTCAG
GATGACAACTGAAGTGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MASQFQNRLVGTIILVALGVIVLPGLLDGKKKHYEDEFAAIPLVPKPGDSQEIDVVPPLNQPLPITPPEGAAQAVGAELN
DDSVSQAANDAGNLAVEPTIVAPPPIQSKPVEVKPTVTKPVDVKPTETKPIETKPAEKKPLEVKPKPEIKPPVEEKAPVG
QAYVVQLGALKNAAKVNEIVAMLRLSGHRAFTVPATPVQGEITRLYVGPDASKQKLQSALPELNALSGLNGQVKPYTTSR

Sequences:

>Translated_240_residues
MASQFQNRLVGTIILVALGVIVLPGLLDGKKKHYEDEFAAIPLVPKPGDSQEIDVVPPLNQPLPITPPEGAAQAVGAELN
DDSVSQAANDAGNLAVEPTIVAPPPIQSKPVEVKPTVTKPVDVKPTETKPIETKPAEKKPLEVKPKPEIKPPVEEKAPVG
QAYVVQLGALKNAAKVNEIVAMLRLSGHRAFTVPATPVQGEITRLYVGPDASKQKLQSALPELNALSGLNGQVKPYTTSR
>Mature_239_residues
ASQFQNRLVGTIILVALGVIVLPGLLDGKKKHYEDEFAAIPLVPKPGDSQEIDVVPPLNQPLPITPPEGAAQAVGAELND
DSVSQAANDAGNLAVEPTIVAPPPIQSKPVEVKPTVTKPVDVKPTETKPIETKPAEKKPLEVKPKPEIKPPVEEKAPVGQ
AYVVQLGALKNAAKVNEIVAMLRLSGHRAFTVPATPVQGEITRLYVGPDASKQKLQSALPELNALSGLNGQVKPYTTSR

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082083, Length=238, Percent_Identity=54.2016806722689, Blast_Score=204, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 25398; Mature: 25266

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQFQNRLVGTIILVALGVIVLPGLLDGKKKHYEDEFAAIPLVPKPGDSQEIDVVPPLN
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCCCCCCCCEEEECCCC
QPLPITPPEGAAQAVGAELNDDSVSQAANDAGNLAVEPTIVAPPPIQSKPVEVKPTVTKP
CCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCEEECCEEECCCCCCCCCEEECCCCCCC
VDVKPTETKPIETKPAEKKPLEVKPKPEIKPPVEEKAPVGQAYVVQLGALKNAAKVNEIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEHHHHHHHHHHHHH
AMLRLSGHRAFTVPATPVQGEITRLYVGPDASKQKLQSALPELNALSGLNGQVKPYTTSR
HHHHHCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASQFQNRLVGTIILVALGVIVLPGLLDGKKKHYEDEFAAIPLVPKPGDSQEIDVVPPLN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCCCCCCCCEEEECCCC
QPLPITPPEGAAQAVGAELNDDSVSQAANDAGNLAVEPTIVAPPPIQSKPVEVKPTVTKP
CCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCEEECCEEECCCCCCCCCEEECCCCCCC
VDVKPTETKPIETKPAEKKPLEVKPKPEIKPPVEEKAPVGQAYVVQLGALKNAAKVNEIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEHHHHHHHHHHHHH
AMLRLSGHRAFTVPATPVQGEITRLYVGPDASKQKLQSALPELNALSGLNGQVKPYTTSR
HHHHHCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3040734; 9205837; 9278503 [H]