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The map label for this gene is yeaW [H]

Identifier: 108812249

GI number: 108812249

Start: 2363129

End: 2363446

Strand: Reverse

Name: yeaW [H]

Synonym: YPN_2087

Alternate gene names: 108812249

Gene position: 2363446-2363129 (Counterclockwise)

Preceding gene: 108812250

Following gene: 108812248

Centisome position: 52.12

GC content: 46.54

Gene sequence:

>318_bases
ATGTTCAATGTGCCGCCACTGAAAGGCATGATGACCGTAATTTATGAGTTCCCAGTCGATGCAGAAACGACGCTGCAAAA
CTATGATATTTATTTTACGAACGAAGAACTGACGGAAGACCAGAAGGCGCTTATCGAATGGTATCGCAATGTCTTTCGCC
CGGAAGATTTACGCTTGGTTGAAAGCGTTCAGAAAGGGCTGAAATCACGCGGCTATCGTGGTCAAGGGCGTATCATGGCT
GATGATAAAGGCAGTGGGATCAGTGAGCATGGTATTGCTCACTTCCATAATCTGGTGGCGAAGGTCTTTCAAGAGTAG

Upstream 100 bases:

>100_bases
AGCCTGCTCACCCAGGATTCGCCGATTCAGTGCAGATTGATCGCTACTGGCACACCATGCACGGTAATTGGTCATTACAA
TTTGGCTATGGCCATGCTCA

Downstream 100 bases:

>100_bases
CCTATTATTATGGCCCACAGTGAGCCGCTGTGGGTCTTCTCTGATAGCGTAAGCAAATAGCTCGCGCAGACACGCTTAAA
ATACCGGGGTTTTCTATGGC

Product: dioxygenase alpha subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MFNVPPLKGMMTVIYEFPVDAETTLQNYDIYFTNEELTEDQKALIEWYRNVFRPEDLRLVESVQKGLKSRGYRGQGRIMA
DDKGSGISEHGIAHFHNLVAKVFQE

Sequences:

>Translated_105_residues
MFNVPPLKGMMTVIYEFPVDAETTLQNYDIYFTNEELTEDQKALIEWYRNVFRPEDLRLVESVQKGLKSRGYRGQGRIMA
DDKGSGISEHGIAHFHNLVAKVFQE
>Mature_105_residues
MFNVPPLKGMMTVIYEFPVDAETTLQNYDIYFTNEELTEDQKALIEWYRNVFRPEDLRLVESVQKGLKSRGYRGQGRIMA
DDKGSGISEHGIAHFHNLVAKVFQE

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=105, Percent_Identity=86.6666666666667, Blast_Score=199, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 12170; Mature: 12170

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNVPPLKGMMTVIYEFPVDAETTLQNYDIYFTNEELTEDQKALIEWYRNVFRPEDLRLV
CCCCCCHHHHHHHHHHCCCCCHHHHCCCEEEECCHHHCHHHHHHHHHHHHHCCCCHHHHH
ESVQKGLKSRGYRGQGRIMADDKGSGISEHGIAHFHNLVAKVFQE
HHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFNVPPLKGMMTVIYEFPVDAETTLQNYDIYFTNEELTEDQKALIEWYRNVFRPEDLRLV
CCCCCCHHHHHHHHHHCCCCCHHHHCCCEEEECCHHHCHHHHHHHHHHHHHCCCCHHHHH
ESVQKGLKSRGYRGQGRIMADDKGSGISEHGIAHFHNLVAKVFQE
HHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]