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The map label for this gene is yeaX [H]

Identifier: 108812248

GI number: 108812248

Start: 2362068

End: 2363033

Strand: Reverse

Name: yeaX [H]

Synonym: YPN_2086

Alternate gene names: 108812248

Gene position: 2363033-2362068 (Counterclockwise)

Preceding gene: 108812249

Following gene: 108812247

Centisome position: 52.11

GC content: 46.79

Gene sequence:

>966_bases
ATGGCGTCTCATCAGATGTTTGACGTTGTGGTCAGCAAGATTGAAGTCATCACATCTGATGTAAAACGGTTTACCCTCAC
CGCGGGCAATGATAGGCCCTTGCCGATTTTTGAGGGCGGAAGCCATATTCTGGTACAGATACCGCTGGGTGAAAAAAACC
TCAGTAATGCCTATTCATTGATGAATTCTCCTTTTGAAACGCACCGCTACCAAATAGCGGTGCGCCTGAGTGAGCATTCT
CGTGGGGGGGCGGATTTTATGCATCACCATGTGAAGGTTGGCGATAAGCTCAGGGTGTCTGGGCCCAATAACTTATTTCC
ACTGGTACCCGAGGCGCAACGCCATCTTCTGATTGCCGGTGGCATTGGCATTACACCGTTTATCTCCCAACTCTATGAAC
TTGAACGTCGTCAGGATCATTACCATCTGCACTATTGTTTTCGCTGTTGTGATGACAATGCCTTTCAATCTGAACTCGAA
AATTCAGCATTTGCTAAACATCTTTCTTGCCATATCTCCTCTCAGGGCAGCCGGTTGGATGTGGTGCGGTTACTGATGGA
TTGTGAACCTGAGACACATATTTATACCTGTGGCTCGGTATCATTGAATAACGCCGTTAAAACGGCGGCAACACAACGCG
GTATACCGCAAACGTATCTCCATTTTGAACAGTTTACGGCTGAGAACCAACGTGGCGGTGAGTTTACGCTCGTACTGGCT
CGCTCTGGCGTGGAACTGAATGTTGGCTGTGATATGACCATCCTACAGGCTATCGAAAACAGTCATGCGGCACAGGTAGA
ATGTTTATGTCGAGAAGGTATTTGTGGAACATGTGAAACAGCGATTCTGGAAGGTGAAGCTGATCACCGTGATCGGTATC
TTACGGATGAAGAAAAAAAGAGTCAGAAATCTATTTTGATTTGTTGCTCAAGGGCAAAAGGGGCGCGGTTAGTGCTAGAT
TTATAA

Upstream 100 bases:

>100_bases
AGTAGCCTATTATTATGGCCCACAGTGAGCCGCTGTGGGTCTTCTCTGATAGCGTAAGCAAATAGCTCGCGCAGACACGC
TTAAAATACCGGGGTTTTCT

Downstream 100 bases:

>100_bases
GAGGAGGGGGCTAATAAGTGATTTTCTGTTTTATCATTGAGTCGGCTTTCTTGTGGTAGATGAAATTGAATGTTGATGCT
CATTAATACGCTAATTTTAT

Product: dioxygenase beta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MASHQMFDVVVSKIEVITSDVKRFTLTAGNDRPLPIFEGGSHILVQIPLGEKNLSNAYSLMNSPFETHRYQIAVRLSEHS
RGGADFMHHHVKVGDKLRVSGPNNLFPLVPEAQRHLLIAGGIGITPFISQLYELERRQDHYHLHYCFRCCDDNAFQSELE
NSAFAKHLSCHISSQGSRLDVVRLLMDCEPETHIYTCGSVSLNNAVKTAATQRGIPQTYLHFEQFTAENQRGGEFTLVLA
RSGVELNVGCDMTILQAIENSHAAQVECLCREGICGTCETAILEGEADHRDRYLTDEEKKSQKSILICCSRAKGARLVLD
L

Sequences:

>Translated_321_residues
MASHQMFDVVVSKIEVITSDVKRFTLTAGNDRPLPIFEGGSHILVQIPLGEKNLSNAYSLMNSPFETHRYQIAVRLSEHS
RGGADFMHHHVKVGDKLRVSGPNNLFPLVPEAQRHLLIAGGIGITPFISQLYELERRQDHYHLHYCFRCCDDNAFQSELE
NSAFAKHLSCHISSQGSRLDVVRLLMDCEPETHIYTCGSVSLNNAVKTAATQRGIPQTYLHFEQFTAENQRGGEFTLVLA
RSGVELNVGCDMTILQAIENSHAAQVECLCREGICGTCETAILEGEADHRDRYLTDEEKKSQKSILICCSRAKGARLVLD
L
>Mature_320_residues
ASHQMFDVVVSKIEVITSDVKRFTLTAGNDRPLPIFEGGSHILVQIPLGEKNLSNAYSLMNSPFETHRYQIAVRLSEHSR
GGADFMHHHVKVGDKLRVSGPNNLFPLVPEAQRHLLIAGGIGITPFISQLYELERRQDHYHLHYCFRCCDDNAFQSELEN
SAFAKHLSCHISSQGSRLDVVRLLMDCEPETHIYTCGSVSLNNAVKTAATQRGIPQTYLHFEQFTAENQRGGEFTLVLAR
SGVELNVGCDMTILQAIENSHAAQVECLCREGICGTCETAILEGEADHRDRYLTDEEKKSQKSILICCSRAKGARLVLDL

Specific function: Unknown

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788104, Length=321, Percent_Identity=58.8785046728972, Blast_Score=389, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35825; Mature: 35694

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASHQMFDVVVSKIEVITSDVKRFTLTAGNDRPLPIFEGGSHILVQIPLGEKNLSNAYSL
CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCEEEEEEECCCCCHHHHHHH
MNSPFETHRYQIAVRLSEHSRGGADFMHHHVKVGDKLRVSGPNNLFPLVPEAQRHLLIAG
HCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEC
GIGITPFISQLYELERRQDHYHLHYCFRCCDDNAFQSELENSAFAKHLSCHISSQGSRLD
CCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCCHHH
VVRLLMDCEPETHIYTCGSVSLNNAVKTAATQRGIPQTYLHFEQFTAENQRGGEFTLVLA
HHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEE
RSGVELNVGCDMTILQAIENSHAAQVECLCREGICGTCETAILEGEADHRDRYLTDEEKK
ECCEEEECCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHEECCCCCCCCCCCCCHHHH
SQKSILICCSRAKGARLVLDL
CCCEEEEEECCCCCCEEEEEC
>Mature Secondary Structure 
ASHQMFDVVVSKIEVITSDVKRFTLTAGNDRPLPIFEGGSHILVQIPLGEKNLSNAYSL
CCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCEEEEEEECCCCCHHHHHHH
MNSPFETHRYQIAVRLSEHSRGGADFMHHHVKVGDKLRVSGPNNLFPLVPEAQRHLLIAG
HCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEC
GIGITPFISQLYELERRQDHYHLHYCFRCCDDNAFQSELENSAFAKHLSCHISSQGSRLD
CCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCCHHH
VVRLLMDCEPETHIYTCGSVSLNNAVKTAATQRGIPQTYLHFEQFTAENQRGGEFTLVLA
HHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEE
RSGVELNVGCDMTILQAIENSHAAQVECLCREGICGTCETAILEGEADHRDRYLTDEEKK
ECCEEEECCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHEECCCCCCCCCCCCCHHHH
SQKSILICCSRAKGARLVLDL
CCCEEEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]