| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812241
Identifier: 108812241
GI number: 108812241
Start: 2347695
End: 2347862
Strand: Reverse
Name: 108812241
Synonym: YPN_2079
Alternate gene names: NA
Gene position: 2347862-2347695 (Counterclockwise)
Preceding gene: 108812242
Following gene: 108812240
Centisome position: 51.78
GC content: 38.69
Gene sequence:
>168_bases ATGCTTAAAGGTTGGCTCTGCTGGAGTAGGTTGCTGGTTTTTGTTTTGGTATTTGACTTGCCAGATCATATGACAAGTGA TGGGCATGATAATAGAGCAGAGAAGCCATCTAATATAAAAGTTGCAGATGATAAGTTCCTGAAAAATAATGGTGTGGATG CTCATTAG
Upstream 100 bases:
>100_bases ATGTCGTGTTAGCTGTACTCATAGGCAAAGTTATCATTGAATTGTTTTTTGTTATTTTTTATCAATTGCCATTTAATATA TCTAAAGAAGATGTATTTAA
Downstream 100 bases:
>100_bases ATCAAAAAAGATTTCCTCAGTGCTAAAGCCGAAATAAAGCTTTATGACATTTATGTTGATAAAGATAACGGACAGTTGTG GATTTTCAGAAAAGGTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MLKGWLCWSRLLVFVLVFDLPDHMTSDGHDNRAEKPSNIKVADDKFLKNNGVDAH
Sequences:
>Translated_55_residues MLKGWLCWSRLLVFVLVFDLPDHMTSDGHDNRAEKPSNIKVADDKFLKNNGVDAH >Mature_55_residues MLKGWLCWSRLLVFVLVFDLPDHMTSDGHDNRAEKPSNIKVADDKFLKNNGVDAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6295; Mature: 6295
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKGWLCWSRLLVFVLVFDLPDHMTSDGHDNRAEKPSNIKVADDKFLKNNGVDAH CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCHHCCCCCCCC >Mature Secondary Structure MLKGWLCWSRLLVFVLVFDLPDHMTSDGHDNRAEKPSNIKVADDKFLKNNGVDAH CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA