Click here to switch to the map view.

The map label for this gene is 108812239

Identifier: 108812239

GI number: 108812239

Start: 2346597

End: 2347094

Strand: Reverse

Name: 108812239

Synonym: YPN_2077

Alternate gene names: NA

Gene position: 2347094-2346597 (Counterclockwise)

Preceding gene: 108812240

Following gene: 108812238

Centisome position: 51.76

GC content: 47.59

Gene sequence:

>498_bases
GTGTGTCACAGGAAGAGAAGTACCAGAACGCGCAGATACAGGTCGTTGCCGCCGCTGAGGAGTACAAGGGGCAAAACTGT
ACAGGGTACCCAGCTTGACGGTGCGGTGATTGGCAGCACGGCGACGGCCGATAAAAACACGCTGGATACCGGGACACTGG
GCTTCAGTGATATCGATAATCAAGCCGATTTCAAGGTTGAACATCAAAGTGTCGGTATCAGTACCGGGGGGAATATCGGC
AGTCAGTTTGTTGGCAATATGGCCAACGGCTTGCTGGTCGGGGCCAATAACGAAGGCCACGCCGACAGCACCACCCATGC
GGCCGTTTCTGAAGGTATGAGAGCGGCTCTTTTAGATATCAGGGTTTTTATGATGTCTATTTATGGGGTTTTTTATCAAT
CAGTTGAAGATATTGACTTTTTTATCAGAGAGACAAAAGAATTTTCTTTCCCTGAAGACTATCAAGTTCCTGAACATTAT
AACTATCGTAGAGAATAA

Upstream 100 bases:

>100_bases
TAGTATTGGAGCTGAAAGTTCTATTGATTTATATATTTATAGTTAAACTCAGTCGTGGAGAATAATGCGCTGAGTGACAT
AATCGAGAACAAAGTCTTTG

Downstream 100 bases:

>100_bases
TGCGCTGGGTCTGGCTCTCAAGGGATGTGGTATCGCTGCACCCTGCCGAAGTCTGATAGCGAAGCAAGTTCTGGAGTTCG
GTGTTAAAGCGGGTATTACG

Product: hypothetical protein

Products: NA

Alternate protein names: Adhesin/Hemagglutinin; Filamentous Haemagglutinin Outer Membrane Protein; Hemolysin; ShlA/HecA/FhaA Exofamily Protein; Adhesin/Hemagglutinin/Hemolysin; Hemolysin/Hemagglutinin-Like Protein; Filamentous Haemagglutinin; Contact-Dependent Inhibitor A; Haemolysin/Haemagglutinin; Adhesin/Haemagluttinin; Adhesin HecA Family; Filamentous Haemagglutinin Family Protein; Adhesin/Hemolysin; Hemagglutinin-Related Protein; Adhesin; Contact-Dependent Inhibition Of Growth Factor CdiA; Hemagglutinin/Adhesin Repeat-Containing Protein; Member Of ShlA/HecA/FhaA Exoprotein Family

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MCHRKRSTRTRRYRSLPPLRSTRGKTVQGTQLDGAVIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIG
SQFVGNMANGLLVGANNEGHADSTTHAAVSEGMRAALLDIRVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQVPEHY
NYRRE

Sequences:

>Translated_165_residues
MCHRKRSTRTRRYRSLPPLRSTRGKTVQGTQLDGAVIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIG
SQFVGNMANGLLVGANNEGHADSTTHAAVSEGMRAALLDIRVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQVPEHY
NYRRE
>Mature_165_residues
MCHRKRSTRTRRYRSLPPLRSTRGKTVQGTQLDGAVIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIG
SQFVGNMANGLLVGANNEGHADSTTHAAVSEGMRAALLDIRVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQVPEHY
NYRRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18321; Mature: 18321

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCHRKRSTRTRRYRSLPPLRSTRGKTVQGTQLDGAVIGSTATADKNTLDTGTLGFSDIDN
CCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
QADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGANNEGHADSTTHAAVSEGMRAALLDI
CCCEEEECCEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
RVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQVPEHYNYRRE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCHRKRSTRTRRYRSLPPLRSTRGKTVQGTQLDGAVIGSTATADKNTLDTGTLGFSDIDN
CCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
QADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGANNEGHADSTTHAAVSEGMRAALLDI
CCCEEEECCEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
RVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQVPEHYNYRRE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA