Click here to switch to the map view.

The map label for this gene is 108812233

Identifier: 108812233

GI number: 108812233

Start: 2340347

End: 2341633

Strand: Reverse

Name: 108812233

Synonym: YPN_2071

Alternate gene names: NA

Gene position: 2341633-2340347 (Counterclockwise)

Preceding gene: 108812237

Following gene: 108812232

Centisome position: 51.64

GC content: 45.61

Gene sequence:

>1287_bases
ATGTTAGAAAAAATGAAGAATACCCTGATTTCATTGGCAATTGCCTCCAGTTGTGTGGTGTTTACTGGCTGTGACAATGA
TACGGCATCGGCTAAAAATGAAAAACAGGACATCACGCTTTGGATAGCGCCGAACAATGTCCAAGAGGCATTCTGGAGCG
AAGTGGTTGGGGAGTGGAATAAACAACCAGATAAAAAGAAAGTCGTCTTCTCAACGATCCCGGCAGCGGGCAGCTCTGAA
GAGGCGATAATGAATGCGATTGCTTCTGATCGCGCACCTGATATCTCAGAAAATATTTTTACCGGCTTTGGTTCTCAGCT
TGCTGACTTAGGGCAGGTCGTTGATCTCTCGACGCTGGATGGCTATGAAAACTTAATTAGTACCCGTCAGATGACGGATA
TTATGGATAATTGGCGCTATAACGGAAAAAACTACATCCTGCCGATTTATATGAACCCGGTACTCTTTTGGTGGCGTGGC
GATTTATTAAAAGAGCAGGGCTTTAGCGAGGTGCCAAAAACGTATGACGAGGTTTACGCACTCTCCGAAAAATACACCAT
TCCAGACAAACGTTATGCGATACAAGCTACTTCTGGCCGTAACTGGTGGGACCGTTGGTTTGATTTTATTGCCCTCTATT
ATGCCCAAAGTGATGGCAAGCCTTATATCGCCAATCAGCAAGCCAGCTATGATAACCAGGCCGGTCGTGACGTTCTGGAC
TTTATGCACACACTCTTTTCAAAAAAATGGACCCTTTATGATTTTGGCCAGGATGATCCATTAGTCACCGGTAAAGTATT
GGGCGCAGTACGCGGTCCTTGGGATATTAGCCGCTACCAACAACAATATCCGGAAATTTTAAAGCACATAAAAATGGGGC
CGATGCTGGTTAAAGAGCAGCAAGATAAACCACATACTTTCGCCGATGGTAAAGGACTGGTGCTGTTTAGTCATTCAAAG
GTTAAACCCGAGGCGTGGGAGTTTATCCAGTGGGTATTCAGCCAGCCCAAATTCGATAAACGTTGGATGGAATTGACCGG
TATGCCACCCGCTAGGGCAGATTTGCTCACCAATCCTTTCTTTGCCGAATATTATCAGGAACACCCGTATGCCGCGGCCT
ACGCTGAATATGTCAACGTGGCGATACCTCCGGTTTCCAGTGGTGAAACGGTGGAAATTCAACGCAGCATGACACAAATG
ATTGAGAAGACCGCGTTTAATACTGCAACGCCTGATGAAGCATTGCAACAGTCAATAAAAGAAGTGAACGCGATTTTAAA
GCCCTAA

Upstream 100 bases:

>100_bases
AATACTTCACATCATTATCGAAATTACGCTGCTATTTTATTTTAACGTTAAAATTGGTCTTCCAGCCTTTTCTTTCAACA
ACGGCCCTGGGAATAGAATA

Downstream 100 bases:

>100_bases
GATTTTAAAACGCTAGGATTTTAAAGTCCTAATATTTTGGAATCCTAGCAGTAAGAATGAGTTAATTTCTTGCTTTCTGC
ATCAAAGTGAGCCAGGTGGC

Product: solute-binding protein

Products: NA

Alternate protein names: Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter Periplasmic Component; ABC-Type Sugar Transport System Periplasmic Component

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MLEKMKNTLISLAIASSCVVFTGCDNDTASAKNEKQDITLWIAPNNVQEAFWSEVVGEWNKQPDKKKVVFSTIPAAGSSE
EAIMNAIASDRAPDISENIFTGFGSQLADLGQVVDLSTLDGYENLISTRQMTDIMDNWRYNGKNYILPIYMNPVLFWWRG
DLLKEQGFSEVPKTYDEVYALSEKYTIPDKRYAIQATSGRNWWDRWFDFIALYYAQSDGKPYIANQQASYDNQAGRDVLD
FMHTLFSKKWTLYDFGQDDPLVTGKVLGAVRGPWDISRYQQQYPEILKHIKMGPMLVKEQQDKPHTFADGKGLVLFSHSK
VKPEAWEFIQWVFSQPKFDKRWMELTGMPPARADLLTNPFFAEYYQEHPYAAAYAEYVNVAIPPVSSGETVEIQRSMTQM
IEKTAFNTATPDEALQQSIKEVNAILKP

Sequences:

>Translated_428_residues
MLEKMKNTLISLAIASSCVVFTGCDNDTASAKNEKQDITLWIAPNNVQEAFWSEVVGEWNKQPDKKKVVFSTIPAAGSSE
EAIMNAIASDRAPDISENIFTGFGSQLADLGQVVDLSTLDGYENLISTRQMTDIMDNWRYNGKNYILPIYMNPVLFWWRG
DLLKEQGFSEVPKTYDEVYALSEKYTIPDKRYAIQATSGRNWWDRWFDFIALYYAQSDGKPYIANQQASYDNQAGRDVLD
FMHTLFSKKWTLYDFGQDDPLVTGKVLGAVRGPWDISRYQQQYPEILKHIKMGPMLVKEQQDKPHTFADGKGLVLFSHSK
VKPEAWEFIQWVFSQPKFDKRWMELTGMPPARADLLTNPFFAEYYQEHPYAAAYAEYVNVAIPPVSSGETVEIQRSMTQM
IEKTAFNTATPDEALQQSIKEVNAILKP
>Mature_428_residues
MLEKMKNTLISLAIASSCVVFTGCDNDTASAKNEKQDITLWIAPNNVQEAFWSEVVGEWNKQPDKKKVVFSTIPAAGSSE
EAIMNAIASDRAPDISENIFTGFGSQLADLGQVVDLSTLDGYENLISTRQMTDIMDNWRYNGKNYILPIYMNPVLFWWRG
DLLKEQGFSEVPKTYDEVYALSEKYTIPDKRYAIQATSGRNWWDRWFDFIALYYAQSDGKPYIANQQASYDNQAGRDVLD
FMHTLFSKKWTLYDFGQDDPLVTGKVLGAVRGPWDISRYQQQYPEILKHIKMGPMLVKEQQDKPHTFADGKGLVLFSHSK
VKPEAWEFIQWVFSQPKFDKRWMELTGMPPARADLLTNPFFAEYYQEHPYAAAYAEYVNVAIPPVSSGETVEIQRSMTQM
IEKTAFNTATPDEALQQSIKEVNAILKP

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48881; Mature: 48881

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKMKNTLISLAIASSCVVFTGCDNDTASAKNEKQDITLWIAPNNVQEAFWSEVVGEWN
CHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC
KQPDKKKVVFSTIPAAGSSEEAIMNAIASDRAPDISENIFTGFGSQLADLGQVVDLSTLD
CCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHCCHHHC
GYENLISTRQMTDIMDNWRYNGKNYILPIYMNPVLFWWRGDLLKEQGFSEVPKTYDEVYA
CHHHHHHHHHHHHHHHCCEECCCCEEEEEEECCEEEECCCHHHHHCCCCHHHHHHHHHHH
LSEKYTIPDKRYAIQATSGRNWWDRWFDFIALYYAQSDGKPYIANQQASYDNQAGRDVLD
HHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHH
FMHTLFSKKWTLYDFGQDDPLVTGKVLGAVRGPWDISRYQQQYPEILKHIKMGPMLVKEQ
HHHHHHCCCCEEEECCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECC
QDKPHTFADGKGLVLFSHSKVKPEAWEFIQWVFSQPKFDKRWMELTGMPPARADLLTNPF
CCCCCEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHCCCH
FAEYYQEHPYAAAYAEYVNVAIPPVSSGETVEIQRSMTQMIEKTAFNTATPDEALQQSIK
HHHHHHHCCHHHHHHHHHHEECCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EVNAILKP
HHHHHCCC
>Mature Secondary Structure
MLEKMKNTLISLAIASSCVVFTGCDNDTASAKNEKQDITLWIAPNNVQEAFWSEVVGEWN
CHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC
KQPDKKKVVFSTIPAAGSSEEAIMNAIASDRAPDISENIFTGFGSQLADLGQVVDLSTLD
CCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHCCHHHC
GYENLISTRQMTDIMDNWRYNGKNYILPIYMNPVLFWWRGDLLKEQGFSEVPKTYDEVYA
CHHHHHHHHHHHHHHHCCEECCCCEEEEEEECCEEEECCCHHHHHCCCCHHHHHHHHHHH
LSEKYTIPDKRYAIQATSGRNWWDRWFDFIALYYAQSDGKPYIANQQASYDNQAGRDVLD
HHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHH
FMHTLFSKKWTLYDFGQDDPLVTGKVLGAVRGPWDISRYQQQYPEILKHIKMGPMLVKEQ
HHHHHHCCCCEEEECCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECC
QDKPHTFADGKGLVLFSHSKVKPEAWEFIQWVFSQPKFDKRWMELTGMPPARADLLTNPF
CCCCCEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHCCCH
FAEYYQEHPYAAAYAEYVNVAIPPVSSGETVEIQRSMTQMIEKTAFNTATPDEALQQSIK
HHHHHHHCCHHHHHHHHHHEECCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EVNAILKP
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA