| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812237
Identifier: 108812237
GI number: 108812237
Start: 2345657
End: 2345782
Strand: Reverse
Name: 108812237
Synonym: YPN_2075
Alternate gene names: NA
Gene position: 2345782-2345657 (Counterclockwise)
Preceding gene: 108812238
Following gene: 108812233
Centisome position: 51.73
GC content: 47.62
Gene sequence:
>126_bases ATGACTGTATTCCCTAATCCAGTTGATGATCCCACCGGGGGTAAGCTGATAAATTCTGCGCCCGATCAAAACAAGGGAAC AGCGTTGGTGACACCAGATAAAAGTGGCGAGAAATGGTGCCAGTAA
Upstream 100 bases:
>100_bases TCATCGCATTTAACAGCACAGAAGAACTCTGGAATACCTACAGCGATTCAGCCAAAGCCTCCTTGTTATCAATAACGTTT GATAGATAATCAACCTGATA
Downstream 100 bases:
>100_bases TACTGATGGCAAGCCGGATACGGGTGGGAATGTGGTTTATAAATAGGGTGTTTTTGAATGATGCTTTGCAAGATGCGATC TGAGTGTCATTCCGGAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 40
Protein sequence:
>41_residues MTVFPNPVDDPTGGKLINSAPDQNKGTALVTPDKSGEKWCQ
Sequences:
>Translated_41_residues MTVFPNPVDDPTGGKLINSAPDQNKGTALVTPDKSGEKWCQ >Mature_40_residues TVFPNPVDDPTGGKLINSAPDQNKGTALVTPDKSGEKWCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4358; Mature: 4227
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFPNPVDDPTGGKLINSAPDQNKGTALVTPDKSGEKWCQ CCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure TVFPNPVDDPTGGKLINSAPDQNKGTALVTPDKSGEKWCQ CCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA