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The map label for this gene is ycfL [H]

Identifier: 108812179

GI number: 108812179

Start: 2280865

End: 2281254

Strand: Reverse

Name: ycfL [H]

Synonym: YPN_2017

Alternate gene names: 108812179

Gene position: 2281254-2280865 (Counterclockwise)

Preceding gene: 108812180

Following gene: 108812178

Centisome position: 50.31

GC content: 49.49

Gene sequence:

>390_bases
ATGCGCGATCTTAAAACGTTGCTATTACCCGTGATATTGTTCGCTTGCGTAACAACATTGCTGGGGTGCAGCAGCCCGCA
AGGGATCGCGGTTAACCCACAGCAAACTGTCGTGATGGATCCATCGGTACTGACGGCCGGTATTCTGGCTTCCCAACCGG
TGATCTCCGCCTCCTCGGGTAAAAATGTTGCCCGCTCGGTGCTCAGTAACAGTCGGAACATACCGGCAAAAATACACTAT
CGTTTTTATTGGTATGATGCGCAGGGGCTGGATGTCCGGCCACTGGAAGCAACGCGTTCTATTGTGATCGCACCGGGTGA
TGATGTGGCTATTCAGTCAATTAACAATAATTTTAATGCGCGCAGTGCGCGTCTCTATTTATTTTTATAA

Upstream 100 bases:

>100_bases
GTCTATCATATTCATATGCATTTGGTCGGTGGCCGTGAGCTTGGCCCTTTGTTGCCCCACAAATAGCCCTATAATAAGTA
AGTTTTGCAGAGGTCAACTT

Downstream 100 bases:

>100_bases
CGGATTGGTTTTTTTATGATCACGTTATTGGAGTGGAACAATGAAAAGGTATTTATCTCTGGCGCTGGCCGCACTGGTGC
TGACGGGTTGCGTTCCTCCG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRDLKTLLLPVILFACVTTLLGCSSPQGIAVNPQQTVVMDPSVLTAGILASQPVISASSGKNVARSVLSNSRNIPAKIHY
RFYWYDAQGLDVRPLEATRSIVIAPGDDVAIQSINNNFNARSARLYLFL

Sequences:

>Translated_129_residues
MRDLKTLLLPVILFACVTTLLGCSSPQGIAVNPQQTVVMDPSVLTAGILASQPVISASSGKNVARSVLSNSRNIPAKIHY
RFYWYDAQGLDVRPLEATRSIVIAPGDDVAIQSINNNFNARSARLYLFL
>Mature_129_residues
MRDLKTLLLPVILFACVTTLLGCSSPQGIAVNPQQTVVMDPSVLTAGILASQPVISASSGKNVARSVLSNSRNIPAKIHY
RFYWYDAQGLDVRPLEATRSIVIAPGDDVAIQSINNNFNARSARLYLFL

Specific function: Unknown

COG id: COG5633

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787347, Length=108, Percent_Identity=45.3703703703704, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010824 [H]

Pfam domain/function: PF07233 DUF1425 [H]

EC number: NA

Molecular weight: Translated: 13987; Mature: 13987

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLKTLLLPVILFACVTTLLGCSSPQGIAVNPQQTVVMDPSVLTAGILASQPVISASSG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEECCCHHHHHHHCCCCEEECCCC
KNVARSVLSNSRNIPAKIHYRFYWYDAQGLDVRPLEATRSIVIAPGDDVAIQSINNNFNA
HHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCC
RSARLYLFL
CEEEEEEEC
>Mature Secondary Structure
MRDLKTLLLPVILFACVTTLLGCSSPQGIAVNPQQTVVMDPSVLTAGILASQPVISASSG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEECCCHHHHHHHCCCCEEECCCC
KNVARSVLSNSRNIPAKIHYRFYWYDAQGLDVRPLEATRSIVIAPGDDVAIQSINNNFNA
HHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCC
RSARLYLFL
CEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]