| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is hinT [H]
Identifier: 108812180
GI number: 108812180
Start: 2281289
End: 2281642
Strand: Reverse
Name: hinT [H]
Synonym: YPN_2018
Alternate gene names: 108812180
Gene position: 2281642-2281289 (Counterclockwise)
Preceding gene: 108812181
Following gene: 108812179
Centisome position: 50.32
GC content: 49.44
Gene sequence:
>354_bases ATGGCCGAAGAAACGATTTTCAGCAAAATTATCCGCCGCGAAATCCCTGCCGATGTGGTTTATCAAGATGAGCTGGTGAC GGCGTTTCGTGATATTGCCCCACAAGCACCGACCCATATCTTAATCATTCCTAATGTTTTGATCCCAACAGTGAATGATG TCACGGCTGAACATGAGGCGGCACTTGGCCGTATGGTAACCGTAGCCGCTAAGCTGGCCGAGCAGGAAGGTATTGCAGAA GACGGCTATCGGTTAATTATCAACTGTAACCACCATGCCGGGCAGGTTGTCTATCATATTCATATGCATTTGGTCGGTGG CCGTGAGCTTGGCCCTTTGTTGCCCCACAAATAG
Upstream 100 bases:
>100_bases TGTCATTCGCCCTGGAAAATGTCTAATCAGGTTGAAACCAATAGAAATTGTCGCTCATACTGCATGTTCTTCAATTTTAT AATGACCAAGGAAATGTGTT
Downstream 100 bases:
>100_bases CCCTATAATAAGTAAGTTTTGCAGAGGTCAACTTATGCGCGATCTTAAAACGTTGCTATTACCCGTGATATTGTTCGCTT GCGTAACAACATTGCTGGGG
Product: purine nucleoside phosphoramidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MAEETIFSKIIRREIPADVVYQDELVTAFRDIAPQAPTHILIIPNVLIPTVNDVTAEHEAALGRMVTVAAKLAEQEGIAE DGYRLIINCNHHAGQVVYHIHMHLVGGRELGPLLPHK
Sequences:
>Translated_117_residues MAEETIFSKIIRREIPADVVYQDELVTAFRDIAPQAPTHILIIPNVLIPTVNDVTAEHEAALGRMVTVAAKLAEQEGIAE DGYRLIINCNHHAGQVVYHIHMHLVGGRELGPLLPHK >Mature_116_residues AEETIFSKIIRREIPADVVYQDELVTAFRDIAPQAPTHILIIPNVLIPTVNDVTAEHEAALGRMVTVAAKLAEQEGIAED GYRLIINCNHHAGQVVYHIHMHLVGGRELGPLLPHK
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI14211923, Length=109, Percent_Identity=45.8715596330275, Blast_Score=110, Evalue=2e-25, Organism=Homo sapiens, GI4885413, Length=107, Percent_Identity=43.9252336448598, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1787346, Length=117, Percent_Identity=84.6153846153846, Blast_Score=188, Evalue=7e-50, Organism=Caenorhabditis elegans, GI17506713, Length=109, Percent_Identity=41.2844036697248, Blast_Score=106, Evalue=2e-24, Organism=Drosophila melanogaster, GI28574010, Length=109, Percent_Identity=44.0366972477064, Blast_Score=106, Evalue=4e-24, Organism=Drosophila melanogaster, GI24581222, Length=109, Percent_Identity=44.0366972477064, Blast_Score=105, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 12943; Mature: 12812
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEETIFSKIIRREIPADVVYQDELVTAFRDIAPQAPTHILIIPNVLIPTVNDVTAEHEA CCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCHHHHH ALGRMVTVAAKLAEQEGIAEDGYRLIINCNHHAGQVVYHIHMHLVGGRELGPLLPHK HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure AEETIFSKIIRREIPADVVYQDELVTAFRDIAPQAPTHILIIPNVLIPTVNDVTAEHEA CHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCHHHHH ALGRMVTVAAKLAEQEGIAEDGYRLIINCNHHAGQVVYHIHMHLVGGRELGPLLPHK HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]