Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is baeS [H]
Identifier: 108811450
GI number: 108811450
Start: 1460469
End: 1461584
Strand: Reverse
Name: baeS [H]
Synonym: YPN_1287
Alternate gene names: 108811450
Gene position: 1461584-1460469 (Counterclockwise)
Preceding gene: 108811451
Following gene: 108811449
Centisome position: 32.23
GC content: 51.88
Gene sequence:
>1116_bases ATGATAAGGATCGGCATTACCGGAAAACTGTTTATGGCTATTTTCGCCACTTGCATGTTGGTATTGATAACCATGCACTG GGGCGTCAGGACCAGTTTTGAACGCGGTTTCATTGACTACATCAAGCAAAGTAATGAACAGCGGATCGCCATGCTAAGTC ATGCGCTTGAAGGCGAATATCAGCACTACGGTAACTGGGATTTTCTGCGTAATAATGACCAAGTGATTTACCAGATCATG CGATCCTTTGAGCAAAACCAAAACAGTGAGAGCAGACCCAGTATGCCGCCCCGTGGCTGGCGCGCCCAATTTTGGGTGGT TGATCAAGACAATAATCTGCTGGTCGGGCACTCCGGGCATCTCCCCACAGAAGCTAGCCGCAGTGCCATAAAAGTCAATG ATCAGGTTGTCGGCTGGGTGATTTCGACCCCATCGGAAAAACTGACCCGTAATGCAGATATCACCTTTGATCAACAACAG CGCCGCACCAGTTGGTTTATTGTTGGCCTCTCGACGCTGCTGGCGGCGGCCGTCACATGGGTACTCTCACGCGGCATGTT AGCCCCAGTAAAACGGCTGGTTGAAGGCACGCATCGGCTGGCCGCGGGGGATTTTAGCACCCGTGTTGCCGTCAGTAGCC GCGATGAACTGGGCCACCTGGCACAAGATTTTAACCAGCTAGCCAGTTCACTGGAAAAAAATGAACAAATGCGCCGTGAT TTTATGGCCGATGTCTCCCATGAACTCCGCACGCCACTGGCAGTATTACGCGGAGAACTGGAAGCCTTACAAGATGGCCT ACGCCAACCCACCCCCGAGTCATTAAGTTCGCTCCAAGCTGAAGTGGCGATTTTGACGAAACTGGTCAATGACCTGCACC AGTTATCACAGTCTGATCGCGGGGCGCTGGCTTACCGTAAAACCCAACTGGATGTGGTCCGGCTATTGCAAGTGGCGATT GCCAGCTTTCATGGCCGCTTCCAGAACAAAAAGATGACCATCACCGCCCACCTGCCTGAACACGCGGTTATTTTTGGCGA CCCTGACCGGCTCAATCAGTTATTTCACAATTTACTGGAAAACAGCCTGCGTTATACCAACGAGGGGGGGCATTAG
Upstream 100 bases:
>100_bases CGCCCTACCCGCCCTGATATTTAACCGCGTTCCCCCGGATACAGGAGCCAATCGTCATTTGGCCCGCTAGATTGGCCGAC TGATAAAGACAGGTGAAATT
Downstream 100 bases:
>100_bases AAATTATCGCGTTGATCCAAGAAGAGACACTCACGCTGCACTGGCAAGACAGTAAACCGGGGGTTAGCGATGAACAGCTC GAGCGCCTTTTTGAACGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MIRIGITGKLFMAIFATCMLVLITMHWGVRTSFERGFIDYIKQSNEQRIAMLSHALEGEYQHYGNWDFLRNNDQVIYQIM RSFEQNQNSESRPSMPPRGWRAQFWVVDQDNNLLVGHSGHLPTEASRSAIKVNDQVVGWVISTPSEKLTRNADITFDQQQ RRTSWFIVGLSTLLAAAVTWVLSRGMLAPVKRLVEGTHRLAAGDFSTRVAVSSRDELGHLAQDFNQLASSLEKNEQMRRD FMADVSHELRTPLAVLRGELEALQDGLRQPTPESLSSLQAEVAILTKLVNDLHQLSQSDRGALAYRKTQLDVVRLLQVAI ASFHGRFQNKKMTITAHLPEHAVIFGDPDRLNQLFHNLLENSLRYTNEGGH
Sequences:
>Translated_371_residues MIRIGITGKLFMAIFATCMLVLITMHWGVRTSFERGFIDYIKQSNEQRIAMLSHALEGEYQHYGNWDFLRNNDQVIYQIM RSFEQNQNSESRPSMPPRGWRAQFWVVDQDNNLLVGHSGHLPTEASRSAIKVNDQVVGWVISTPSEKLTRNADITFDQQQ RRTSWFIVGLSTLLAAAVTWVLSRGMLAPVKRLVEGTHRLAAGDFSTRVAVSSRDELGHLAQDFNQLASSLEKNEQMRRD FMADVSHELRTPLAVLRGELEALQDGLRQPTPESLSSLQAEVAILTKLVNDLHQLSQSDRGALAYRKTQLDVVRLLQVAI ASFHGRFQNKKMTITAHLPEHAVIFGDPDRLNQLFHNLLENSLRYTNEGGH >Mature_371_residues MIRIGITGKLFMAIFATCMLVLITMHWGVRTSFERGFIDYIKQSNEQRIAMLSHALEGEYQHYGNWDFLRNNDQVIYQIM RSFEQNQNSESRPSMPPRGWRAQFWVVDQDNNLLVGHSGHLPTEASRSAIKVNDQVVGWVISTPSEKLTRNADITFDQQQ RRTSWFIVGLSTLLAAAVTWVLSRGMLAPVKRLVEGTHRLAAGDFSTRVAVSSRDELGHLAQDFNQLASSLEKNEQMRRD FMADVSHELRTPLAVLRGELEALQDGLRQPTPESLSSLQAEVAILTKLVNDLHQLSQSDRGALAYRKTQLDVVRLLQVAI ASFHGRFQNKKMTITAHLPEHAVIFGDPDRLNQLFHNLLENSLRYTNEGGH
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=370, Percent_Identity=65.4054054054054, Blast_Score=486, Evalue=1e-138, Organism=Escherichia coli, GI1786600, Length=199, Percent_Identity=29.1457286432161, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1788713, Length=152, Percent_Identity=28.9473684210526, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI145693157, Length=164, Percent_Identity=27.4390243902439, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1786783, Length=203, Percent_Identity=24.6305418719212, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42115; Mature: 42115
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIGITGKLFMAIFATCMLVLITMHWGVRTSFERGFIDYIKQSNEQRIAMLSHALEGEY CEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCH QHYGNWDFLRNNDQVIYQIMRSFEQNQNSESRPSMPPRGWRAQFWVVDQDNNLLVGHSGH HHCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCC LPTEASRSAIKVNDQVVGWVISTPSEKLTRNADITFDQQQRRTSWFIVGLSTLLAAAVTW CCCHHCCCEEEECCEEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VLSRGMLAPVKRLVEGTHRLAAGDFSTRVAVSSRDELGHLAQDFNQLASSLEKNEQMRRD HHHCCHHHHHHHHHHHHHHHHCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH FMADVSHELRTPLAVLRGELEALQDGLRQPTPESLSSLQAEVAILTKLVNDLHQLSQSDR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GALAYRKTQLDVVRLLQVAIASFHGRFQNKKMTITAHLPEHAVIFGDPDRLNQLFHNLLE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHH NSLRYTNEGGH HHHCCCCCCCC >Mature Secondary Structure MIRIGITGKLFMAIFATCMLVLITMHWGVRTSFERGFIDYIKQSNEQRIAMLSHALEGEY CEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCH QHYGNWDFLRNNDQVIYQIMRSFEQNQNSESRPSMPPRGWRAQFWVVDQDNNLLVGHSGH HHCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCC LPTEASRSAIKVNDQVVGWVISTPSEKLTRNADITFDQQQRRTSWFIVGLSTLLAAAVTW CCCHHCCCEEEECCEEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VLSRGMLAPVKRLVEGTHRLAAGDFSTRVAVSSRDELGHLAQDFNQLASSLEKNEQMRRD HHHCCHHHHHHHHHHHHHHHHCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH FMADVSHELRTPLAVLRGELEALQDGLRQPTPESLSSLQAEVAILTKLVNDLHQLSQSDR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GALAYRKTQLDVVRLLQVAIASFHGRFQNKKMTITAHLPEHAVIFGDPDRLNQLFHNLLE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHH NSLRYTNEGGH HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]