Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is 108811439
Identifier: 108811439
GI number: 108811439
Start: 1451698
End: 1451976
Strand: Reverse
Name: 108811439
Synonym: YPN_1276
Alternate gene names: NA
Gene position: 1451976-1451698 (Counterclockwise)
Preceding gene: 108811440
Following gene: 108811437
Centisome position: 32.02
GC content: 39.78
Gene sequence:
>279_bases ATGACATATAAAAAGTATAACTCCAGTTGGGAAGGCTACATGGGGGATGTTTTAAACGGTAATGTTGGCATTAACCAGCT AAAACCTCAACATGAGTATTTTGATGCTATAGGGCTAGGAAAGGTATTAAGTGAGAATACACAATACCATGCAGTTCTCA CATTAGCAGAAGCCAAAAGTATTATTGAAGATATTAACCCTCCTCGGACACAAAGCCCAAGTAACGGAGAAGCACTGGCA CGAGGATTTGAGATAGAGCCTGTCCATAATTCTGTGTAA
Upstream 100 bases:
>100_bases TTACTTAAAGAGAGTAACAAGGTGACTAAGGTAAGAGAGTAGCCAACGCACATACAGATTGAAGTATGACAGATATAAAA CATATTAAAGAGGGATCTGA
Downstream 100 bases:
>100_bases CTGCCACCGTATTAAAGGTGATCGCTCAGGCGGTCACCGAACTCGATAATAAAACGGCTCATCGCTAACCGCCAGTTCTG GATCGGCATACTCCATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MTYKKYNSSWEGYMGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKSIIEDINPPRTQSPSNGEALA RGFEIEPVHNSV
Sequences:
>Translated_92_residues MTYKKYNSSWEGYMGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKSIIEDINPPRTQSPSNGEALA RGFEIEPVHNSV >Mature_91_residues TYKKYNSSWEGYMGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKSIIEDINPPRTQSPSNGEALAR GFEIEPVHNSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10193; Mature: 10062
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYKKYNSSWEGYMGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH IIEDINPPRTQSPSNGEALARGFEIEPVHNSV HHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure TYKKYNSSWEGYMGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH IIEDINPPRTQSPSNGEALARGFEIEPVHNSV HHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA