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The map label for this gene is yafU [C]

Identifier: 108811437

GI number: 108811437

Start: 1449752

End: 1450453

Strand: Reverse

Name: yafU [C]

Synonym: YPN_1274

Alternate gene names: 108811437

Gene position: 1450453-1449752 (Counterclockwise)

Preceding gene: 108811439

Following gene: 108811436

Centisome position: 31.99

GC content: 40.88

Gene sequence:

>702_bases
GTGAAGATATCAAAAACAGGCAATTACACAATATTGTTTACAGTCTCTACTAATCCTGTGGCGCGGGTGTTTTCCGTTAC
CGATCCTATTTCTGCTTATGCCGGAAATATCTACGACTCACGGGGAGTCTATGATGTTATCCGAGAATTTAAGCGATTCA
GCATCACCGCGACAGAGTATGTGGGCGAGAATGGGCGTAAGTATATTCACATTTCTGGTTATGCCGGCCTTAGGCGTATT
ATCACTGGAACCCGTTATGGTGCCAGCCACCCACAAATGCTATCAATGGGAATCGGCCAGCAAGGTCTCAGTTCCAATAT
TGTTAAAGGTCTAAAATTCTGTATTCTCTTTTCTATTGGCTATCGAACGATTGAAGGTATCTTTAAAGATGAATATACCT
TAGCGGAATTTATCGGCAATATAACGATGGATATGGCTAAAATAGCCATTGTCGCGGCGACTTCTTTTATTGTAGGTGTA
CTCTTCACTGCGACAGTTCTTGCAGGTGGCAGTATTATTGTCGTTGCTGGGGTAGCTTTTGCCGTTGGCTTTGTAGCTAC
CGCTATCCTAGATCATTTCGATGAAAAGTATGGTATAAGTGAAAAATTAATCGCATTATTAACCAAAGAAATGAGAAAAA
AACCAAGAACACAAGAAGCAAACTTTCAGTCTATTCTTAATGGATTAGGGCGACTTAAATGA

Upstream 100 bases:

>100_bases
ATGCATTAAGGTCGGCTTCGGTTTTAAGACCTTTAGCCAGTTCAGCCGCAAGTGCTTTAAGTTTCTTTTCGTCCATAATT
TGCCTGTCTCCGTTGTTGGA

Downstream 100 bases:

>100_bases
ATAATAGATTATTTAAAACATTAGGTGCAATCATAGCATTATTAATATTTACGCCAATGATATATTTAGTGAGCACTTAC
ATCATTTCATTAATAAAAAT

Product: membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKISKTGNYTILFTVSTNPVARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRI
ITGTRYGASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGV
LFTATVLAGGSIIVVAGVAFAVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK

Sequences:

>Translated_233_residues
MKISKTGNYTILFTVSTNPVARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRI
ITGTRYGASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGV
LFTATVLAGGSIIVVAGVAFAVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK
>Mature_233_residues
MKISKTGNYTILFTVSTNPVARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRI
ITGTRYGASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGV
LFTATVLAGGSIIVVAGVAFAVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25438; Mature: 25438

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISKTGNYTILFTVSTNPVARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEY
CCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHH
VGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIG
HCCCCCEEEEEECHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
YRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVLAGGSIIVVAGVAF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKISKTGNYTILFTVSTNPVARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEY
CCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHH
VGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIG
HCCCCCEEEEEECHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
YRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVLAGGSIIVVAGVAF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA