Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is 108811435
Identifier: 108811435
GI number: 108811435
Start: 1448444
End: 1448863
Strand: Reverse
Name: 108811435
Synonym: YPN_1272
Alternate gene names: NA
Gene position: 1448863-1448444 (Counterclockwise)
Preceding gene: 108811436
Following gene: 108811434
Centisome position: 31.95
GC content: 30.95
Gene sequence:
>420_bases GTGAAGTGGATCAGGGTAATTGAGATGAAAAATAGACTTTTCAATGCACTACTTGGGGTTATGTTATTATTAATTATCAC TCCCATGATGTTATTAGTAGGAAGTTACGTTATTTCACTAATGCGAATGGAAGACGAAATAACATTCTCTAGTTCTATTT TCATATCTTTACTTTCATCTCCTCTCGTTTTTTATGCTCTCGCGGGTTCTACTTGTGAATTTATATTTAATAAATTACCA AAATCTAGAAAAATAGTTATAAAATACTTAACAATGCTAGCCATCGCATCATTTATCATTAGTCTCCCCGTGTCTTTTTA TGTTGATTACAAATTAAAAAGTAATAGTTATGTGGTATGTGACAGAATTTCATGGATGTCGCCGAATACTTATGTAAAAG ACTTATCACTTTGTAGATAA
Upstream 100 bases:
>100_bases TGTGACAAAATCTCATGGATGTCGCCGAATTTTTATGTAAGAGATTTATCACTTTGTAGATAAAAATAAAATATTTAACA AGAAAATAATTTTAAATACA
Downstream 100 bases:
>100_bases ATATAAAATATTTAACAGAAAAAGATAATTATAAATATAGTAAAGTGGCTCTGGGTAATTGAGATGAAAAATAGATTATT TAAAACATTAGGCGGGTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKWIRVIEMKNRLFNALLGVMLLLIITPMMLLVGSYVISLMRMEDEITFSSSIFISLLSSPLVFYALAGSTCEFIFNKLP KSRKIVIKYLTMLAIASFIISLPVSFYVDYKLKSNSYVVCDRISWMSPNTYVKDLSLCR
Sequences:
>Translated_139_residues MKWIRVIEMKNRLFNALLGVMLLLIITPMMLLVGSYVISLMRMEDEITFSSSIFISLLSSPLVFYALAGSTCEFIFNKLP KSRKIVIKYLTMLAIASFIISLPVSFYVDYKLKSNSYVVCDRISWMSPNTYVKDLSLCR >Mature_139_residues MKWIRVIEMKNRLFNALLGVMLLLIITPMMLLVGSYVISLMRMEDEITFSSSIFISLLSSPLVFYALAGSTCEFIFNKLP KSRKIVIKYLTMLAIASFIISLPVSFYVDYKLKSNSYVVCDRISWMSPNTYVKDLSLCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15975; Mature: 15975
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWIRVIEMKNRLFNALLGVMLLLIITPMMLLVGSYVISLMRMEDEITFSSSIFISLLSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLVFYALAGSTCEFIFNKLPKSRKIVIKYLTMLAIASFIISLPVSFYVDYKLKSNSYVVC HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCEEEE DRISWMSPNTYVKDLSLCR ECCCCCCCCHHHHHHHHCC >Mature Secondary Structure MKWIRVIEMKNRLFNALLGVMLLLIITPMMLLVGSYVISLMRMEDEITFSSSIFISLLSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLVFYALAGSTCEFIFNKLPKSRKIVIKYLTMLAIASFIISLPVSFYVDYKLKSNSYVVC HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCEEEE DRISWMSPNTYVKDLSLCR ECCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA