Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108811436

Identifier: 108811436

GI number: 108811436

Start: 1448901

End: 1449296

Strand: Reverse

Name: 108811436

Synonym: YPN_1273

Alternate gene names: NA

Gene position: 1449296-1448901 (Counterclockwise)

Preceding gene: 108811437

Following gene: 108811435

Centisome position: 31.96

GC content: 26.01

Gene sequence:

>396_bases
ATGAAAAATAGACCTTTCAACATTCTATTTGGAATGATAATATTTTCAGTGGTTTTATTTATGATGTATTTGGTTTTTTT
ATGTCTCATTTCATTAATTAGAATGGAAGATAAAATAACATTCTCAAGTTCTATTGTTATATGTTTGATTTCGTCTCCTC
TATTATTTTATGCTACCGCAGGGTCTGTTTATATTTTTGTATTTAATAAAGAACCTAAATTTAACAAAATGATTGTAAAA
TACTTAACTATGCTAGCAATAGCATCATTCATCATGAGTTTTCCTATTTCTTTTTATGTTGATTACAAATTAAAAAGTAA
TGGCTATGTAGTATGTGACAAAATCTCATGGATGTCGCCGAATTTTTATGTAAGAGATTTATCACTTTGTAGATAA

Upstream 100 bases:

>100_bases
GAATACTTATGTAAAAGACTTATCACTTTGTAGATAAATATAAAATATTCAACAGAAAAAGATAATTATAAATACAGTAA
ACTGGAACCGAGTAATTAAG

Downstream 100 bases:

>100_bases
AAATAAAATATTTAACAAGAAAATAATTTTAAATACAGTGAAGTGGATCAGGGTAATTGAGATGAAAAATAGACTTTTCA
ATGCACTACTTGGGGTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKNRPFNILFGMIIFSVVLFMMYLVFLCLISLIRMEDKITFSSSIVICLISSPLLFYATAGSVYIFVFNKEPKFNKMIVK
YLTMLAIASFIMSFPISFYVDYKLKSNGYVVCDKISWMSPNFYVRDLSLCR

Sequences:

>Translated_131_residues
MKNRPFNILFGMIIFSVVLFMMYLVFLCLISLIRMEDKITFSSSIVICLISSPLLFYATAGSVYIFVFNKEPKFNKMIVK
YLTMLAIASFIMSFPISFYVDYKLKSNGYVVCDKISWMSPNFYVRDLSLCR
>Mature_131_residues
MKNRPFNILFGMIIFSVVLFMMYLVFLCLISLIRMEDKITFSSSIVICLISSPLLFYATAGSVYIFVFNKEPKFNKMIVK
YLTMLAIASFIMSFPISFYVDYKLKSNGYVVCDKISWMSPNFYVRDLSLCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15268; Mature: 15268

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
9.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRPFNILFGMIIFSVVLFMMYLVFLCLISLIRMEDKITFSSSIVICLISSPLLFYATA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEECCCEEEEEEC
GSVYIFVFNKEPKFNKMIVKYLTMLAIASFIMSFPISFYVDYKLKSNGYVVCDKISWMSP
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEEECCCCCC
NFYVRDLSLCR
CEEEECCCCCC
>Mature Secondary Structure
MKNRPFNILFGMIIFSVVLFMMYLVFLCLISLIRMEDKITFSSSIVICLISSPLLFYATA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEECCCEEEEEEC
GSVYIFVFNKEPKFNKMIVKYLTMLAIASFIMSFPISFYVDYKLKSNGYVVCDKISWMSP
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEEECCCCCC
NFYVRDLSLCR
CEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA