Click here to switch to the map view.

The map label for this gene is yhfZ [H]

Identifier: 108811390

GI number: 108811390

Start: 1395427

End: 1395831

Strand: Reverse

Name: yhfZ [H]

Synonym: YPN_1227

Alternate gene names: 108811390

Gene position: 1395831-1395427 (Counterclockwise)

Preceding gene: 108811391

Following gene: 108811383

Centisome position: 30.78

GC content: 44.44

Gene sequence:

>405_bases
ATGTCGATGGTCATCAACTTATTTTTCGCCGTGGTGAGCAAAAAAAAAATCCGCCGGGTTGGGTTTGACTCACGTTCACC
TGATCAATGTTTATTGACTGAAATTAAGTTTGCCGGGCAACCAATCGAACGGGTCGAATTATCTTACAGTAACTGCATCC
CGCACCTTATCCGTGGCGATATTGATGCTGTCATTTGGAATCAGGAACAGATTGTCCCGTCAGAATATTTACAGTCAATA
AAGTTACAGGGCGATGAACGCTATATTCAAGCGTCACAGGCGGTTATCCTTATCCGCCCAGATAACTATCCGATCAAGCT
ACTGTTGGAAAGAGGCATTAATCAAACACAGTTACTGCGCCATCAACGGGCGGTACAGAGTGGGATAGTCGAACCTCGAT
ATTAA

Upstream 100 bases:

>100_bases
AGCTAATCCTGAGTAAAACGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGA
CAATTTAGGCCGTGGTTCTT

Downstream 100 bases:

>100_bases
TAGATTAATAAATAGTGAATAGAGACATTAGCCAGAGAACGCTGGGCTATATAGGTTGGATTGTATATATTGAATTATAT
TATTTTGGATTATATGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSMVINLFFAVVSKKKIRRVGFDSRSPDQCLLTEIKFAGQPIERVELSYSNCIPHLIRGDIDAVIWNQEQIVPSEYLQSI
KLQGDERYIQASQAVILIRPDNYPIKLLLERGINQTQLLRHQRAVQSGIVEPRY

Sequences:

>Translated_134_residues
MSMVINLFFAVVSKKKIRRVGFDSRSPDQCLLTEIKFAGQPIERVELSYSNCIPHLIRGDIDAVIWNQEQIVPSEYLQSI
KLQGDERYIQASQAVILIRPDNYPIKLLLERGINQTQLLRHQRAVQSGIVEPRY
>Mature_133_residues
SMVINLFFAVVSKKKIRRVGFDSRSPDQCLLTEIKFAGQPIERVELSYSNCIPHLIRGDIDAVIWNQEQIVPSEYLQSIK
LQGDERYIQASQAVILIRPDNYPIKLLLERGINQTQLLRHQRAVQSGIVEPRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994934, Length=121, Percent_Identity=42.1487603305785, Blast_Score=106, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15465; Mature: 15334

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMVINLFFAVVSKKKIRRVGFDSRSPDQCLLTEIKFAGQPIERVELSYSNCIPHLIRGD
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHCCHHHCCHHHHCCC
IDAVIWNQEQIVPSEYLQSIKLQGDERYIQASQAVILIRPDNYPIKLLLERGINQTQLLR
CCEEEECCCCCCHHHHHHHHHCCCCHHEEECCCEEEEECCCCCCEEHHHHCCCCHHHHHH
HQRAVQSGIVEPRY
HHHHHHHCCCCCCC
>Mature Secondary Structure 
SMVINLFFAVVSKKKIRRVGFDSRSPDQCLLTEIKFAGQPIERVELSYSNCIPHLIRGD
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHCCHHHCCHHHHCCC
IDAVIWNQEQIVPSEYLQSIKLQGDERYIQASQAVILIRPDNYPIKLLLERGINQTQLLR
CCEEEECCCCCCHHHHHHHHHCCCCHHEEECCCEEEEECCCCCCEEHHHHCCCCHHHHHH
HQRAVQSGIVEPRY
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]