Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108811383

Identifier: 108811383

GI number: 108811383

Start: 1386850

End: 1387410

Strand: Reverse

Name: 108811383

Synonym: YPN_1220

Alternate gene names: NA

Gene position: 1387410-1386850 (Counterclockwise)

Preceding gene: 108811390

Following gene: 108811382

Centisome position: 30.6

GC content: 40.46

Gene sequence:

>561_bases
ATGAAAATAATCTATATCACTTTTGCCTCTGCGGTGTTGTTCAACTCACCATCGCTAGCATATAACCCCCTTTTCTCATC
ATTTCCTCCCATTTATTGGGTATATAATTCCCCCACAGCGACCACTTGGCTTAAGCTTGAAAATCAATTTAATCCACTCT
ATTTGATGACAAGCTCCTTTTGGTTTACGCAGCATGGCAATTCAGCCCAACAATTGACAAATCTGGCATTAATAACCAGT
AATGGTGCTGTATCTGGCAATTTTTCAATAGAGGGAGTCCAAACGAATTATTGGCTTGATCGCGGGCAGGGACAAATCGA
GATAACAGCTACAACCCATGAACATTTGTTGATAACCGCTTATCTCTTTGATGTGAATGGTCAGGAAAAAGCACAAACCG
CGACATTAATTAATAATCGAACAAAAAACCTGATATTACTCTTAGATAATATCGTGGCAGGAAATTATCGGCTGGTTATT
AAAGCGTTAGCCACTGACCATCAAACCGCCATTAAAACCTTCCACATAACCTTAGCCGATATCGTTCCCCAGACACGCTA
G

Upstream 100 bases:

>100_bases
TTCATCGAGGCAAGCGTTCATTGATGCAAACGTTCATTGATGCAAGATAGCGGTGAGTGACTGCTGCAAATTTTCGCCCC
CCATAAAGGAAGATATTCAC

Downstream 100 bases:

>100_bases
TCACTAACAAAAAAGATAGCGTACTGCCTATATAAAAATTAACACCCAACAGGAAGAGTTCTTCCTACTCAATGGGTATG
TGCTAAATATATCCATTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKIIYITFASAVLFNSPSLAYNPLFSSFPPIYWVYNSPTATTWLKLENQFNPLYLMTSSFWFTQHGNSAQQLTNLALITS
NGAVSGNFSIEGVQTNYWLDRGQGQIEITATTHEHLLITAYLFDVNGQEKAQTATLINNRTKNLILLLDNIVAGNYRLVI
KALATDHQTAIKTFHITLADIVPQTR

Sequences:

>Translated_186_residues
MKIIYITFASAVLFNSPSLAYNPLFSSFPPIYWVYNSPTATTWLKLENQFNPLYLMTSSFWFTQHGNSAQQLTNLALITS
NGAVSGNFSIEGVQTNYWLDRGQGQIEITATTHEHLLITAYLFDVNGQEKAQTATLINNRTKNLILLLDNIVAGNYRLVI
KALATDHQTAIKTFHITLADIVPQTR
>Mature_186_residues
MKIIYITFASAVLFNSPSLAYNPLFSSFPPIYWVYNSPTATTWLKLENQFNPLYLMTSSFWFTQHGNSAQQLTNLALITS
NGAVSGNFSIEGVQTNYWLDRGQGQIEITATTHEHLLITAYLFDVNGQEKAQTATLINNRTKNLILLLDNIVAGNYRLVI
KALATDHQTAIKTFHITLADIVPQTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20873; Mature: 20873

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIYITFASAVLFNSPSLAYNPLFSSFPPIYWVYNSPTATTWLKLENQFNPLYLMTSSF
CEEEEEEEEEEEEECCCCCEECCHHHCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEEE
WFTQHGNSAQQLTNLALITSNGAVSGNFSIEGVQTNYWLDRGQGQIEITATTHEHLLITA
EEEECCCCHHHHEEEEEEECCCEEECCEEEEEEEEEEEEECCCCEEEEEEECCCEEEEEE
YLFDVNGQEKAQTATLINNRTKNLILLLDNIVAGNYRLVIKALATDHQTAIKTFHITLAD
EEEECCCCCHHHEEEECCCCCCEEEEEEECEECCCEEEEEEEECCCCCCEEEEEEEEEHH
IVPQTR
HCCCCC
>Mature Secondary Structure
MKIIYITFASAVLFNSPSLAYNPLFSSFPPIYWVYNSPTATTWLKLENQFNPLYLMTSSF
CEEEEEEEEEEEEECCCCCEECCHHHCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEEE
WFTQHGNSAQQLTNLALITSNGAVSGNFSIEGVQTNYWLDRGQGQIEITATTHEHLLITA
EEEECCCCHHHHEEEEEEECCCEEECCEEEEEEEEEEEEECCCCEEEEEEECCCEEEEEE
YLFDVNGQEKAQTATLINNRTKNLILLLDNIVAGNYRLVIKALATDHQTAIKTFHITLAD
EEEECCCCCHHHEEEECCCCCCEEEEEEECEECCCEEEEEEEECCCCCCEEEEEEEEEHH
IVPQTR
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA