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The map label for this gene is yagU [C]

Identifier: 108811222

GI number: 108811222

Start: 1220455

End: 1221009

Strand: Reverse

Name: yagU [C]

Synonym: YPN_1058

Alternate gene names: 108811222

Gene position: 1221009-1220455 (Counterclockwise)

Preceding gene: 108811224

Following gene: 108811221

Centisome position: 26.93

GC content: 45.23

Gene sequence:

>555_bases
TTGGCTATGTCTGAAAAAAGAGTGAATCTACAAGTCATTGCATGGGCCACGATCATCGGTGGATTCGTCAGCTCGCTAGT
AAAATCAGGAACTGAAGTGAATATGCCTCCCCGCGTAGTTGGTGAGATATCGCCTCCTGCGGCAAATATTGACGCATGGC
TTGGGTGGCTAGGAATTAATTCTCATTCGATGGACTATGTTTATCAAGGGGTAACCATTTCGGGGGCTGTAGTGCTCTAT
CACTGGCTATTTAGTTTTGTTTTTGCTTTTGTTTATGTCCTATTGTCCGCCTATTGGCCCAAAGTCAGATTATGGTATAG
CGCAGCCTATGGATTGAGTATCACTGTCGCCATACATGGGGTTCTGATACCAGCATTAGGCTTCAGGCATCCAGCTTACT
TGGCGGGTGAAACTGGGTGGTTATGGAATCTCAATGGGTATGAATTATGGAGTGAAATAATAGGGCATCTCTGCTGGTCT
GCCTCTCTTGAGATCTGCCTGGTTGCTGTCCTTGCCTTTTTCTCAAAACCCATTAAAGGGATATGGGCAAATTAA

Upstream 100 bases:

>100_bases
CCTTTACTGAATCGAATACTCCACCATTTTTCCTTTACCGCCTATTAACGCTTTTTTATCTTTTTTGTAAAATTCTCCAT
GCAAAAACGAGAGGAGAACT

Downstream 100 bases:

>100_bases
AACTCCGTTTTATTTAATACTTGCTGTACCAACGCCCTGAAACGCTCTCAGGGCATGACTCTGCCATAGCTTCGTTTTTA
GGGTTCAGGTCAATTGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Inner Membrane Protein YagU; Phage Membrane Protein

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MAMSEKRVNLQVIAWATIIGGFVSSLVKSGTEVNMPPRVVGEISPPAANIDAWLGWLGINSHSMDYVYQGVTISGAVVLY
HWLFSFVFAFVYVLLSAYWPKVRLWYSAAYGLSITVAIHGVLIPALGFRHPAYLAGETGWLWNLNGYELWSEIIGHLCWS
ASLEICLVAVLAFFSKPIKGIWAN

Sequences:

>Translated_184_residues
MAMSEKRVNLQVIAWATIIGGFVSSLVKSGTEVNMPPRVVGEISPPAANIDAWLGWLGINSHSMDYVYQGVTISGAVVLY
HWLFSFVFAFVYVLLSAYWPKVRLWYSAAYGLSITVAIHGVLIPALGFRHPAYLAGETGWLWNLNGYELWSEIIGHLCWS
ASLEICLVAVLAFFSKPIKGIWAN
>Mature_183_residues
AMSEKRVNLQVIAWATIIGGFVSSLVKSGTEVNMPPRVVGEISPPAANIDAWLGWLGINSHSMDYVYQGVTISGAVVLYH
WLFSFVFAFVYVLLSAYWPKVRLWYSAAYGLSITVAIHGVLIPALGFRHPAYLAGETGWLWNLNGYELWSEIIGHLCWSA
SLEICLVAVLAFFSKPIKGIWAN

Specific function: Unknown

COG id: COG3477

COG function: function code S; Predicted periplasmic/secreted protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786481, Length=184, Percent_Identity=29.8913043478261, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20367; Mature: 20236

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMSEKRVNLQVIAWATIIGGFVSSLVKSGTEVNMPPRVVGEISPPAANIDAWLGWLGIN
CCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCC
SHSMDYVYQGVTISGAVVLYHWLFSFVFAFVYVLLSAYWPKVRLWYSAAYGLSITVAIHG
CCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHCCCEEHHHHHH
VLIPALGFRHPAYLAGETGWLWNLNGYELWSEIIGHLCWSASLEICLVAVLAFFSKPIKG
HHHHHHCCCCCCEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IWAN
CCCC
>Mature Secondary Structure 
AMSEKRVNLQVIAWATIIGGFVSSLVKSGTEVNMPPRVVGEISPPAANIDAWLGWLGIN
CCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCC
SHSMDYVYQGVTISGAVVLYHWLFSFVFAFVYVLLSAYWPKVRLWYSAAYGLSITVAIHG
CCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHCCCEEHHHHHH
VLIPALGFRHPAYLAGETGWLWNLNGYELWSEIIGHLCWSASLEICLVAVLAFFSKPIKG
HHHHHHCCCCCCEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IWAN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA