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The map label for this gene is yfeT [C]

Identifier: 108811224

GI number: 108811224

Start: 1221637

End: 1222491

Strand: Reverse

Name: yfeT [C]

Synonym: YPN_1060

Alternate gene names: 108811224

Gene position: 1222491-1221637 (Counterclockwise)

Preceding gene: 108811236

Following gene: 108811222

Centisome position: 26.96

GC content: 55.91

Gene sequence:

>855_bases
ATGACTACAGCAAGCAATCTGAGTGAACTACAGCAGCAGATCCGTGATCGTTACGACAACCTGAGTAAGCGGCTGCAGCA
AGTCTCCCGCTATGTGTTGGACAATACCAACAGCGTGGCGTTTGACACCGTTGCCGTCATTGCCGAACGCGCAGACGTGC
CTCCGTCAACCTTAATTCGTTTTGCTAACGCCTTTGATTTCAGTGGCTTCAACGAGATGAAACAGCTGTTTCGTATGAAT
CTGGTGGAAGAGACCGCGAGTTATACCGATCGTGCACGGCTGTTTCGCGCAATGGAAAGCGAAGCCGTGCCGGAAACGCC
ACTCGGTATCCTGCAAGAGTTTGCCCGATCCAATGCTCAGGCACTACAGCAGTTGGCGGCACGTACTGAGCCAGAGATGC
TGCAACGTGCGGTGGAACTGCTTGCTCAGGCCGATACCATTTATGTGGTGGGCCTGCGCCGCTCGTTCAGCGTGGCCGCC
TATCTGACCTACGCACTCAGCCATTTAGAATGTCGCCCAGTACAACTTCATGGCCTCGGGGGGATGTTGCGCGAGCAGGT
GAACAGCATTAAAGCACGCGATATCGTGGTTTCTATCAGTTTCTCTCCTTACGCCGAAGAGACCGTGATGGTCAGCGAAA
TAGCCGCTAGCGCGGGTGCCCGGCAGATTGTCATTACCGACAGCCAGATAAGCCCGCTCGCCACGTTCAGCGATCTCTGT
TTTGTGGTGAAAGAGGCTCAGGTAGATGCCTTCCGATCTCAATCAGCCACGCTCTGTCTAGTGCAGTCGCTGGTCGTGGC
GTTGGCCTACCAGCAGGAGGCGCAGGCCGGGGCCGCGCTGGCGCACAGACAGTGA

Upstream 100 bases:

>100_bases
TCCCGGAGCGTCTGTTTCATTTTGTGGGTAGTCTGAGTGACAGGCGTTTAAAAACAGCCGTTGAGCGATTACATTCAAAT
CATGTATTAAGGGAGAAATA

Downstream 100 bases:

>100_bases
CCCTCTATAAGCTGCCTGTGCGGCAGTGAACTCTGTACGCATACCGCCATCTTGCATCAGTCTTTTCTAAGCTGCCTGTG
CGGCAGTGAACAGCAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVAVIAERADVPPSTLIRFANAFDFSGFNEMKQLFRMN
LVEETASYTDRARLFRAMESEAVPETPLGILQEFARSNAQALQQLAARTEPEMLQRAVELLAQADTIYVVGLRRSFSVAA
YLTYALSHLECRPVQLHGLGGMLREQVNSIKARDIVVSISFSPYAEETVMVSEIAASAGARQIVITDSQISPLATFSDLC
FVVKEAQVDAFRSQSATLCLVQSLVVALAYQQEAQAGAALAHRQ

Sequences:

>Translated_284_residues
MTTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVAVIAERADVPPSTLIRFANAFDFSGFNEMKQLFRMN
LVEETASYTDRARLFRAMESEAVPETPLGILQEFARSNAQALQQLAARTEPEMLQRAVELLAQADTIYVVGLRRSFSVAA
YLTYALSHLECRPVQLHGLGGMLREQVNSIKARDIVVSISFSPYAEETVMVSEIAASAGARQIVITDSQISPLATFSDLC
FVVKEAQVDAFRSQSATLCLVQSLVVALAYQQEAQAGAALAHRQ
>Mature_283_residues
TTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVAVIAERADVPPSTLIRFANAFDFSGFNEMKQLFRMNL
VEETASYTDRARLFRAMESEAVPETPLGILQEFARSNAQALQQLAARTEPEMLQRAVELLAQADTIYVVGLRRSFSVAAY
LTYALSHLECRPVQLHGLGGMLREQVNSIKARDIVVSISFSPYAEETVMVSEIAASAGARQIVITDSQISPLATFSDLCF
VVKEAQVDAFRSQSATLCLVQSLVVALAYQQEAQAGAALAHRQ

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31407; Mature: 31276

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVAVIAERADVPPSTLIR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH
FANAFDFSGFNEMKQLFRMNLVEETASYTDRARLFRAMESEAVPETPLGILQEFARSNAQ
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHH
ALQQLAARTEPEMLQRAVELLAQADTIYVVGLRRSFSVAAYLTYALSHLECRPVQLHGLG
HHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCH
GMLREQVNSIKARDIVVSISFSPYAEETVMVSEIAASAGARQIVITDSQISPLATFSDLC
HHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
FVVKEAQVDAFRSQSATLCLVQSLVVALAYQQEAQAGAALAHRQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVAVIAERADVPPSTLIR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH
FANAFDFSGFNEMKQLFRMNLVEETASYTDRARLFRAMESEAVPETPLGILQEFARSNAQ
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHH
ALQQLAARTEPEMLQRAVELLAQADTIYVVGLRRSFSVAAYLTYALSHLECRPVQLHGLG
HHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCH
GMLREQVNSIKARDIVVSISFSPYAEETVMVSEIAASAGARQIVITDSQISPLATFSDLC
HHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
FVVKEAQVDAFRSQSATLCLVQSLVVALAYQQEAQAGAALAHRQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]