Definition | Yersinia pestis Nepal516, complete genome. |
---|---|
Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is tesA [H]
Identifier: 108811174
GI number: 108811174
Start: 1167854
End: 1168492
Strand: Reverse
Name: tesA [H]
Synonym: YPN_1009
Alternate gene names: 108811174
Gene position: 1168492-1167854 (Counterclockwise)
Preceding gene: 108811178
Following gene: 108811173
Centisome position: 25.77
GC content: 51.17
Gene sequence:
>639_bases ATGATGAACTTCAAGAACGTTTTCCGCTGGCATCTTCCCTTCCTTTTACTGTTGGGATTATTCAGTTTGCGTGCCGCCGC AACCGATACACTATTGATTCTCGGCGACAGTTTAAGCGCCGGTTACCGCCTGCCTATTGCACAGGCATGGCCTTCGCTAT TGGATAAAAAATGGCAAGCCACGCCTTCATTACCGAAGGTGGTCAATGCCAGTATCAGTGGAGATACCGCCGCGCAAGGG CTAGCGCGCTTACCCGCTCTACTCAAACAACATCAGCCACGCTGGGTGCTGATTGAACTGGGCGCCAATGACGCGCTGCG CGGGTTTCCGACGCAGGACATTCAACGGGATCTGAGCGAAATTATCAATCAGATAACCGCAGCGAAAGCCCAGCCATTAT TGATGCAAATCCGTATTCCCCCTAACTATGGCCGCCGTTATACTGATGCTTTCACCGCTATCTATCCACAACTGGCGCAA CAGTTCGACATCCCCCTACTCCCTTTTTTTATGGAACAGGTTGCCGTTAAGCCAGAGTGGATGCAGGATGATGGTTTACA CCCTAACGGCGATGCCCAACCGTTTATCGCGGATTGGATGGCGCAACAACTCAAGCCGTTAGTTGTTGATCCGAAATAA
Upstream 100 bases:
>100_bases ACTCGCCAATCAGCGCAATTGTCTGGGCAGGTTTGACAACCAGCTCAACTCCGGTAAGGATGGAGAGCTGTTGCTCACCC TGACCGACGTGCTTATTAAG
Downstream 100 bases:
>100_bases ATATGATTTAAACATCGCTCAGACTGTTAGCCCTGTTTTGACAGGTTAATCAGGCTAGAAAAAAGGGAAAGCGCACTAAA AGTGCGGTAATCCCTTCGCT
Product: multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1
Products: NA
Alternate protein names: Lecithinase B; Lysophospholipase L1; Protease I [H]
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MMNFKNVFRWHLPFLLLLGLFSLRAAATDTLLILGDSLSAGYRLPIAQAWPSLLDKKWQATPSLPKVVNASISGDTAAQG LARLPALLKQHQPRWVLIELGANDALRGFPTQDIQRDLSEIINQITAAKAQPLLMQIRIPPNYGRRYTDAFTAIYPQLAQ QFDIPLLPFFMEQVAVKPEWMQDDGLHPNGDAQPFIADWMAQQLKPLVVDPK
Sequences:
>Translated_212_residues MMNFKNVFRWHLPFLLLLGLFSLRAAATDTLLILGDSLSAGYRLPIAQAWPSLLDKKWQATPSLPKVVNASISGDTAAQG LARLPALLKQHQPRWVLIELGANDALRGFPTQDIQRDLSEIINQITAAKAQPLLMQIRIPPNYGRRYTDAFTAIYPQLAQ QFDIPLLPFFMEQVAVKPEWMQDDGLHPNGDAQPFIADWMAQQLKPLVVDPK >Mature_212_residues MMNFKNVFRWHLPFLLLLGLFSLRAAATDTLLILGDSLSAGYRLPIAQAWPSLLDKKWQATPSLPKVVNASISGDTAAQG LARLPALLKQHQPRWVLIELGANDALRGFPTQDIQRDLSEIINQITAAKAQPLLMQIRIPPNYGRRYTDAFTAIYPQLAQ QFDIPLLPFFMEQVAVKPEWMQDDGLHPNGDAQPFIADWMAQQLKPLVVDPK
Specific function: Hydrolyzes only long chain acyl thioesters (C12-C18). Specificity similar to chymotrypsin [H]
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786702, Length=208, Percent_Identity=71.1538461538462, Blast_Score=310, Evalue=5e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001087 - InterPro: IPR008265 [H]
Pfam domain/function: PF00657 Lipase_GDSL [H]
EC number: =3.1.1.5 [H]
Molecular weight: Translated: 23806; Mature: 23806
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNFKNVFRWHLPFLLLLGLFSLRAAATDTLLILGDSLSAGYRLPIAQAWPSLLDKKWQA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC TPSLPKVVNASISGDTAAQGLARLPALLKQHQPRWVLIELGANDALRGFPTQDIQRDLSE CCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH IINQITAAKAQPLLMQIRIPPNYGRRYTDAFTAIYPQLAQQFDIPLLPFFMEQVAVKPEW HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC MQDDGLHPNGDAQPFIADWMAQQLKPLVVDPK CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MMNFKNVFRWHLPFLLLLGLFSLRAAATDTLLILGDSLSAGYRLPIAQAWPSLLDKKWQA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC TPSLPKVVNASISGDTAAQGLARLPALLKQHQPRWVLIELGANDALRGFPTQDIQRDLSE CCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH IINQITAAKAQPLLMQIRIPPNYGRRYTDAFTAIYPQLAQQFDIPLLPFFMEQVAVKPEW HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC MQDDGLHPNGDAQPFIADWMAQQLKPLVVDPK CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]