Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is ampG [H]
Identifier: 108811094
GI number: 108811094
Start: 1079372
End: 1080850
Strand: Reverse
Name: ampG [H]
Synonym: YPN_0929
Alternate gene names: 108811094
Gene position: 1080850-1079372 (Counterclockwise)
Preceding gene: 108811095
Following gene: 108811093
Centisome position: 23.84
GC content: 49.02
Gene sequence:
>1479_bases ATGCCCAATCGCTATTCAAACCTTTTTACCCAACGTAACTCTATCATTCTTCTGTTATTGGGCTTTGCCTCAGGCCTTCC TTTAGCGCTGACCAGTGGCACACTGCAGGCATGGATGACCGTGGAAAATGTCAATCTTAAGACGATTGGTATTTTCTCGC TGGTTGGCCAAGCCTATGTCTTTAAGTTTCTTTGGTCCCCGCTGATGGACCGCTACACGCCGTCCTTTTTAGGGCGTCGG CGCGGTTGGTTACTGGTAAGCCAGCTATTACTCATTATTGCCATTATCGCGATGGGCTTTATGGAGCCTGCCAAACATTT ATGGTGGCTGGCAGCGGTCGCGGTATTAGTCGCATTTTGTTCAGCTTCTCAAGATATCGTTTTTGATGCTTATAAAACTG ACTTGCTTACTACTGAAGAGCGCGGTACGGGGGCGGCAGTATCGGTACTAGGCTACCGCCTGGCAATGCTGGTTTCCGGT GGGTTAGCGTTGTGGATTGCAGATCGCTATCTTGGCTGGCAATCAACTTATTGGCTAATGGCCGGATTGATGTTGATTGG GGTATTCGCTACCTTGCTCGCCCCTGAACCCGATATCCGAATTGCCCCACCAAAAACATTGGAGCAGGCCATTGTCGCTC CATTACGTGATTTTTTTGGTCGTAATAATGCTTGGCTGATCTTGCTGCTTATTGTGTTTTACAAAATGGGAGATGCGTTT GCCGCAAGCCTGAGTACAACTTTTCTGATACGTGGCGTCGGGTTTGATGCCGGTGAAGTGGGGTTGGTGAATAAAACGCT GGGGCTGATCGCCACGATTATTGGCGCTCTCTATGGCGGCCTATTAATGCAACGGCTGAGCTTATTCCGTGCCTTAATGA TTTTCGGTATTTTACAAGCAGTTTCTAACATGGGCTATTGGCTACTCGCTATCACTGATAAAAATATATTCTCCATGGGC AGTGCCATATTTTTGGAGAACTTATGCGGAGGGATGGGAACAGCAGCCTTTGTCGCATTACTCATGACACTCTGTAACAA GTCCTTCTCCGCCACACAGTTTGCCCTCTTATCGGCCCTCTCTGCTGTGGGCCGGGTTTATGTTGGCCCGATTGCCGGTT GGTTTGTAGAGGCCCATGGCTGGCCACTTTTCTATTTATTCTCTATTGCCGCCGCCATTCCAGGGCTATTGCTACTGTAT GTCTGCCGTCAAACGCTGGATCATACGCAGAAAACCGACGAATTTATGCCCCGGATCGCATTTAAAACGGCTTACCGTTG GGCACTACGTTTACTCATTATTGGCGGTCTGTTGCTGTCTGTGTGGCTAATCTTGTTGATATGTAACGCACTAGATTGGA CCTCTGCACCCCAAGTGGCCGATACCTTACTCTTGAGGGGGATTCAGTTCAGCATCGTCGGGATGACTCTCGGGGGGCTG CTGGATTATTTAGCGCTCAGACGGCAAAAACTAGCCTAG
Upstream 100 bases:
>100_bases TTTTTTTGCTCAACACAACTATAACCTTCACTTAGCATAATTATAGTTGCTCAACAGAATGCTCTGCCCGATACCTTGCG GCAGAGCAGGTAGATTTATT
Downstream 100 bases:
>100_bases TAAATCACATAAGTGACATAAAGCCGGTGCTGTTCAGTTTGTGCACTGGCTTTTTTGTGTTTATCCGAAAAACAAACCTG ACAAATAAACCCCACAAATA
Product: muropeptide transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MPNRYSNLFTQRNSIILLLLGFASGLPLALTSGTLQAWMTVENVNLKTIGIFSLVGQAYVFKFLWSPLMDRYTPSFLGRR RGWLLVSQLLLIIAIIAMGFMEPAKHLWWLAAVAVLVAFCSASQDIVFDAYKTDLLTTEERGTGAAVSVLGYRLAMLVSG GLALWIADRYLGWQSTYWLMAGLMLIGVFATLLAPEPDIRIAPPKTLEQAIVAPLRDFFGRNNAWLILLLIVFYKMGDAF AASLSTTFLIRGVGFDAGEVGLVNKTLGLIATIIGALYGGLLMQRLSLFRALMIFGILQAVSNMGYWLLAITDKNIFSMG SAIFLENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPIAGWFVEAHGWPLFYLFSIAAAIPGLLLLY VCRQTLDHTQKTDEFMPRIAFKTAYRWALRLLIIGGLLLSVWLILLICNALDWTSAPQVADTLLLRGIQFSIVGMTLGGL LDYLALRRQKLA
Sequences:
>Translated_492_residues MPNRYSNLFTQRNSIILLLLGFASGLPLALTSGTLQAWMTVENVNLKTIGIFSLVGQAYVFKFLWSPLMDRYTPSFLGRR RGWLLVSQLLLIIAIIAMGFMEPAKHLWWLAAVAVLVAFCSASQDIVFDAYKTDLLTTEERGTGAAVSVLGYRLAMLVSG GLALWIADRYLGWQSTYWLMAGLMLIGVFATLLAPEPDIRIAPPKTLEQAIVAPLRDFFGRNNAWLILLLIVFYKMGDAF AASLSTTFLIRGVGFDAGEVGLVNKTLGLIATIIGALYGGLLMQRLSLFRALMIFGILQAVSNMGYWLLAITDKNIFSMG SAIFLENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPIAGWFVEAHGWPLFYLFSIAAAIPGLLLLY VCRQTLDHTQKTDEFMPRIAFKTAYRWALRLLIIGGLLLSVWLILLICNALDWTSAPQVADTLLLRGIQFSIVGMTLGGL LDYLALRRQKLA >Mature_491_residues PNRYSNLFTQRNSIILLLLGFASGLPLALTSGTLQAWMTVENVNLKTIGIFSLVGQAYVFKFLWSPLMDRYTPSFLGRRR GWLLVSQLLLIIAIIAMGFMEPAKHLWWLAAVAVLVAFCSASQDIVFDAYKTDLLTTEERGTGAAVSVLGYRLAMLVSGG LALWIADRYLGWQSTYWLMAGLMLIGVFATLLAPEPDIRIAPPKTLEQAIVAPLRDFFGRNNAWLILLLIVFYKMGDAFA ASLSTTFLIRGVGFDAGEVGLVNKTLGLIATIIGALYGGLLMQRLSLFRALMIFGILQAVSNMGYWLLAITDKNIFSMGS AIFLENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPIAGWFVEAHGWPLFYLFSIAAAIPGLLLLYV CRQTLDHTQKTDEFMPRIAFKTAYRWALRLLIIGGLLLSVWLILLICNALDWTSAPQVADTLLLRGIQFSIVGMTLGGLL DYLALRRQKLA
Specific function: Probably acts as a permease in the beta-lactamase induction system and in peptidoglycan recycling [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=491, Percent_Identity=73.1160896130346, Blast_Score=701, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004752 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 54047; Mature: 53916
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNRYSNLFTQRNSIILLLLGFASGLPLALTSGTLQAWMTVENVNLKTIGIFSLVGQAYV CCCHHHHHHHCCCCCEEEEEHHHCCCCEEEECCHHHHHEEEECCCEEHHHHHHHHHHHHH FKFLWSPLMDRYTPSFLGRRRGWLLVSQLLLIIAIIAMGFMEPAKHLWWLAAVAVLVAFC HHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SASQDIVFDAYKTDLLTTEERGTGAAVSVLGYRLAMLVSGGLALWIADRYLGWQSTYWLM CCCCCCEEEHHHHHCEECCCCCCCHHHHHHHHHHHHHHHCCHHEEHHHHHCCCCHHHHHH AGLMLIGVFATLLAPEPDIRIAPPKTLEQAIVAPLRDFFGRNNAWLILLLIVFYKMGDAF HHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHH AASLSTTFLIRGVGFDAGEVGLVNKTLGLIATIIGALYGGLLMQRLSLFRALMIFGILQA HHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSNMGYWLLAITDKNIFSMGSAIFLENLCGGMGTAAFVALLMTLCNKSFSATQFALLSAL HHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH SAVGRVYVGPIAGWFVEAHGWPLFYLFSIAAAIPGLLLLYVCRQTLDHTQKTDEFMPRIA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKTAYRWALRLLIIGGLLLSVWLILLICNALDWTSAPQVADTLLLRGIQFSIVGMTLGGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHH LDYLALRRQKLA HHHHHHHHHHCC >Mature Secondary Structure PNRYSNLFTQRNSIILLLLGFASGLPLALTSGTLQAWMTVENVNLKTIGIFSLVGQAYV CCHHHHHHHCCCCCEEEEEHHHCCCCEEEECCHHHHHEEEECCCEEHHHHHHHHHHHHH FKFLWSPLMDRYTPSFLGRRRGWLLVSQLLLIIAIIAMGFMEPAKHLWWLAAVAVLVAFC HHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SASQDIVFDAYKTDLLTTEERGTGAAVSVLGYRLAMLVSGGLALWIADRYLGWQSTYWLM CCCCCCEEEHHHHHCEECCCCCCCHHHHHHHHHHHHHHHCCHHEEHHHHHCCCCHHHHHH AGLMLIGVFATLLAPEPDIRIAPPKTLEQAIVAPLRDFFGRNNAWLILLLIVFYKMGDAF HHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHH AASLSTTFLIRGVGFDAGEVGLVNKTLGLIATIIGALYGGLLMQRLSLFRALMIFGILQA HHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSNMGYWLLAITDKNIFSMGSAIFLENLCGGMGTAAFVALLMTLCNKSFSATQFALLSAL HHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH SAVGRVYVGPIAGWFVEAHGWPLFYLFSIAAAIPGLLLLYVCRQTLDHTQKTDEFMPRIA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKTAYRWALRLLIIGGLLLSVWLILLICNALDWTSAPQVADTLLLRGIQFSIVGMTLGGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHH LDYLALRRQKLA HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]