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The map label for this gene is yfeN [H]

Identifier: 108811093

GI number: 108811093

Start: 1078313

End: 1079080

Strand: Reverse

Name: yfeN [H]

Synonym: YPN_0928

Alternate gene names: 108811093

Gene position: 1079080-1078313 (Counterclockwise)

Preceding gene: 108811094

Following gene: 108811092

Centisome position: 23.8

GC content: 43.62

Gene sequence:

>768_bases
ATGCGTAAAATTCTTATCGGCACTGCAGCGCTGGCAACAGTGACTTTGGCGCCATCCGTCCAAGCTGAATACCAATGGGG
GTTCGGTAATGTCAGCTTGAACTACCTTGACTGGACCAGAAGCACTACGCATAAATCAGGTGATTCCTCGCATAAAGATG
ACTTTGCCTATATTGAGTTAGAAGGCGGGGCAGGCTTCAGTTGGGGGGAAGTTTATGGTTTCTTCGATTTAGAAAACCCC
TTCAATTCAAAAACAGCCCAACCAGGTGATAATCAACGCTATACCTTTAAAACAACTGGCCGCTACTATCTGGGTGACAG
CGGTTTTAACCTTTATGGTCATGTTTACGGTACATACTCTCTGCCTGGGGATAACAGAAACTTCCATGAAGTAAATACAC
TGTATGGGATTGGCTATAACGCTGCTTTCGATGCTCTGTGGCTAAAACCTTTTGTTGCCCTGCACTATGTTGATCAAACT
TACTATTCAGGTAACAACGGCTATGTGGTTGGTTGGGTTGCTGGCTATGACTTCACGGCTTTCGATGAAAAATTCAGCAT
CACTAACTGGAATGAACTGGAATTTAACCGTGCAGAAGCCTATGCAGCAGGCAATGGCGGGAAAAATGGTATCAACGGCG
CTATCGCATTGTGGTGGACACCGGTTAAGCCGCTTACTACCGGTATTCAATACCGTTATGCCTATAAAAAATTAGGTGAA
GACTTTTTACAAGATGGTATCGTTTACTCAATTAAATATAATTTCTAA

Upstream 100 bases:

>100_bases
TTTATCCTTTCGTGCTCCGAGACTATGATGAGCGCACTTTTTGCTAAGGACTCACTCCCTTCGCTTTTCCTTAATATTTT
TCATCTACACAGAGGCATTT

Downstream 100 bases:

>100_bases
CTATAACTAAATGATTCCGAGGTGCCTATTTAGGACACCTCGAAATATATTTTAATTTACCTTTGCATTACATATTATTC
ACACGAAATAAGTTCGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRKILIGTAALATVTLAPSVQAEYQWGFGNVSLNYLDWTRSTTHKSGDSSHKDDFAYIELEGGAGFSWGEVYGFFDLENP
FNSKTAQPGDNQRYTFKTTGRYYLGDSGFNLYGHVYGTYSLPGDNRNFHEVNTLYGIGYNAAFDALWLKPFVALHYVDQT
YYSGNNGYVVGWVAGYDFTAFDEKFSITNWNELEFNRAEAYAAGNGGKNGINGAIALWWTPVKPLTTGIQYRYAYKKLGE
DFLQDGIVYSIKYNF

Sequences:

>Translated_255_residues
MRKILIGTAALATVTLAPSVQAEYQWGFGNVSLNYLDWTRSTTHKSGDSSHKDDFAYIELEGGAGFSWGEVYGFFDLENP
FNSKTAQPGDNQRYTFKTTGRYYLGDSGFNLYGHVYGTYSLPGDNRNFHEVNTLYGIGYNAAFDALWLKPFVALHYVDQT
YYSGNNGYVVGWVAGYDFTAFDEKFSITNWNELEFNRAEAYAAGNGGKNGINGAIALWWTPVKPLTTGIQYRYAYKKLGE
DFLQDGIVYSIKYNF
>Mature_255_residues
MRKILIGTAALATVTLAPSVQAEYQWGFGNVSLNYLDWTRSTTHKSGDSSHKDDFAYIELEGGAGFSWGEVYGFFDLENP
FNSKTAQPGDNQRYTFKTTGRYYLGDSGFNLYGHVYGTYSLPGDNRNFHEVNTLYGIGYNAAFDALWLKPFVALHYVDQT
YYSGNNGYVVGWVAGYDFTAFDEKFSITNWNELEFNRAEAYAAGNGGKNGINGAIALWWTPVKPLTTGIQYRYAYKKLGE
DFLQDGIVYSIKYNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.parahaemolyticus ompK [H]

Homologues:

Organism=Escherichia coli, GI1788747, Length=255, Percent_Identity=58.4313725490196, Blast_Score=297, Evalue=4e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 28714; Mature: 28714

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKILIGTAALATVTLAPSVQAEYQWGFGNVSLNYLDWTRSTTHKSGDSSHKDDFAYIEL
CCEEEEEEEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEE
EGGAGFSWGEVYGFFDLENPFNSKTAQPGDNQRYTFKTTGRYYLGDSGFNLYGHVYGTYS
ECCCCCCHHHEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCEEEEEEEEEEE
LPGDNRNFHEVNTLYGIGYNAAFDALWLKPFVALHYVDQTYYSGNNGYVVGWVAGYDFTA
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHEEEEEEEHEEEECCCCEEEEEEECCCEEE
FDEKFSITNWNELEFNRAEAYAAGNGGKNGINGAIALWWTPVKPLTTGIQYRYAYKKLGE
CCCEEECCCCCCEECCCCEEEECCCCCCCCCCCEEEEEEECCCHHHCCEEEEHHHHHHHH
DFLQDGIVYSIKYNF
HHHHCCEEEEEEECC
>Mature Secondary Structure
MRKILIGTAALATVTLAPSVQAEYQWGFGNVSLNYLDWTRSTTHKSGDSSHKDDFAYIEL
CCEEEEEEEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEE
EGGAGFSWGEVYGFFDLENPFNSKTAQPGDNQRYTFKTTGRYYLGDSGFNLYGHVYGTYS
ECCCCCCHHHEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCEEEEEEEEEEE
LPGDNRNFHEVNTLYGIGYNAAFDALWLKPFVALHYVDQTYYSGNNGYVVGWVAGYDFTA
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHEEEEEEEHEEEECCCCEEEEEEECCCEEE
FDEKFSITNWNELEFNRAEAYAAGNGGKNGINGAIALWWTPVKPLTTGIQYRYAYKKLGE
CCCEEECCCCCCEECCCCEEEECCCCCCCCCCCEEEEEEECCCHHHCCEEEEHHHHHHHH
DFLQDGIVYSIKYNF
HHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559336; 9205837; 9278503 [H]