Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797938
Identifier: 108797938
GI number: 108797938
Start: 1067179
End: 1067787
Strand: Direct
Name: 108797938
Synonym: Mmcs_0964
Alternate gene names: NA
Gene position: 1067179-1067787 (Clockwise)
Preceding gene: 108797937
Following gene: 108797939
Centisome position: 18.7
GC content: 74.55
Gene sequence:
>609_bases ATGACCGTGGCCGCGACCGTCTTCGGTGCCCCGCTCCTGGTGAGCGAGGTCGACGTGCGCGAGGCGCACCTGCGCTCCGC CGTCCCCGCGGCCGCGTTACCGCGACCCGGTACCAGCGAGGGCCGCCAACTCCGGCGGTGGCTGACCCAACTGCTCGTCG CGGAGCGGGTCGTCGCCGCCGAGGCTGCCGCCCTGAACGTGTGCGAGGACGACGCCCCCGACGAGGACGCCCTGCTGCCC GATACGGCGGCGCGCCTGGAGATCGGCAGCATCGCCGGTTCGGTGCTCGCCTCCCCGCGGGCGCGGGCGGTGTTCGCCGG TGTGACCGCGCATGTCGACGTCGGCGACGCCGAGGTCCGCGCCTACTACGAGCGAAACCCGTTGCAGTTCCGCAGCTTTG ACGTGGTCGACGGCTGGCGGCGACCCGACGGGCCGGTGGCCCCGCTGGACCAGGTCGCCGACGGTATCCGCGCCGACCTG CGCGCCGCCGCACAACGGAGGGAGTTCCGCCGCTGGCTCGACGCGCGCTGCGCCGCCGCGGTCCGCCTCGCCCCCGGATA CGAACACCCCGGCGACCCCACCCAACCCGACAACACGCACAGGCACTGA
Upstream 100 bases:
>100_bases GGCCGCCGCGGTGGCTGCCGCCCGGCCGGTGGTGGGCGTTGATCCGCGTCGCCGCGGCGGGACGGCTGGTCTACTCGCCC GCGGTCGAGGTGGTGGTCCG
Downstream 100 bases:
>100_bases GATGACCGACCTGACGCTGGCCCTGGACATCGGCGGCACGAAGATCGCCGTCGGACTCGTCGACGCCGACGGCACCGTCG TGCAGCGGGCCCAGCTGCCC
Product: FabD2
Products: NA
Alternate protein names: LOW QUALITY PROTEIN Alpha-Mannosidase
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTVAATVFGAPLLVSEVDVREAHLRSAVPAAALPRPGTSEGRQLRRWLTQLLVAERVVAAEAAALNVCEDDAPDEDALLP DTAARLEIGSIAGSVLASPRARAVFAGVTAHVDVGDAEVRAYYERNPLQFRSFDVVDGWRRPDGPVAPLDQVADGIRADL RAAAQRREFRRWLDARCAAAVRLAPGYEHPGDPTQPDNTHRH
Sequences:
>Translated_202_residues MTVAATVFGAPLLVSEVDVREAHLRSAVPAAALPRPGTSEGRQLRRWLTQLLVAERVVAAEAAALNVCEDDAPDEDALLP DTAARLEIGSIAGSVLASPRARAVFAGVTAHVDVGDAEVRAYYERNPLQFRSFDVVDGWRRPDGPVAPLDQVADGIRADL RAAAQRREFRRWLDARCAAAVRLAPGYEHPGDPTQPDNTHRH >Mature_201_residues TVAATVFGAPLLVSEVDVREAHLRSAVPAAALPRPGTSEGRQLRRWLTQLLVAERVVAAEAAALNVCEDDAPDEDALLPD TAARLEIGSIAGSVLASPRARAVFAGVTAHVDVGDAEVRAYYERNPLQFRSFDVVDGWRRPDGPVAPLDQVADGIRADLR AAAQRREFRRWLDARCAAAVRLAPGYEHPGDPTQPDNTHRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21839; Mature: 21707
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAATVFGAPLLVSEVDVREAHLRSAVPAAALPRPGTSEGRQLRRWLTQLLVAERVVAA CEEECHHHCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EAAALNVCEDDAPDEDALLPDTAARLEIGSIAGSVLASPRARAVFAGVTAHVDVGDAEVR HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEECEEEEEECCCHHHH AYYERNPLQFRSFDVVDGWRRPDGPVAPLDQVADGIRADLRAAAQRREFRRWLDARCAAA HHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRLAPGYEHPGDPTQPDNTHRH HHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TVAATVFGAPLLVSEVDVREAHLRSAVPAAALPRPGTSEGRQLRRWLTQLLVAERVVAA EEECHHHCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EAAALNVCEDDAPDEDALLPDTAARLEIGSIAGSVLASPRARAVFAGVTAHVDVGDAEVR HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEECEEEEEECCCHHHH AYYERNPLQFRSFDVVDGWRRPDGPVAPLDQVADGIRADLRAAAQRREFRRWLDARCAAA HHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRLAPGYEHPGDPTQPDNTHRH HHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA