Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797909
Identifier: 108797909
GI number: 108797909
Start: 1031039
End: 1032091
Strand: Direct
Name: 108797909
Synonym: Mmcs_0935
Alternate gene names: NA
Gene position: 1031039-1032091 (Clockwise)
Preceding gene: 108797908
Following gene: 108797910
Centisome position: 18.07
GC content: 56.51
Gene sequence:
>1053_bases ATGAGCATTGCCGCTGCCGAGGGGAACCTAGGAGATCTTTTTATAAGGCGGACTGTGACCCGACTGGTGCAGGCGAAAGG TCACGAAGCGGTCCTCTACACCGGGAAGATGGGCAAGAGTTATGTCGATGCTTTCGAATTGCCGCCCAACTGGGTAGCTA CTCCGTCACCGATGCGGTTTCTTAAGATGCTCGCTGCATCCTGCTTTCAACGCCGTGCGGTAATAGTAATGGCGCCGGCT CCGGCTCGTCTAGATGCAAAGATAAGCGCGGTAGGGAAGAGGCTCGGCGTTGCACTACTAATCGCCTTGTCCAGCGCACT CGGAAACCACGTGGCAGTCATGGGGCGTGCGATCCGAGGGTCCGGATTTCTCGCGCTCTGCGGAGAGAAACTTATCGCGA GGTGCAGTTCGCTCTATATCGCTCGCGATAAGCAGACAGTGCTTATTGCGGGTGGCCGAGCGCAGTTCAAGCCCGATCTC GGTTTTGCTGCCATCTCGCTCCGAATTAAGGCAGAGTCCACCCTGCGGCCCACACGCAACATTGTCGCTCTCTCGCTGCG GTATACACCCGACACGAAGACAGTTCGAAACTTTGTATCCGAGATGCAGTCAGCAGGATTCAAGGTAGTAACTGTGACGC AAGTCCAACAGGACAGAGCCCTCAACGACGAAATCGCGCGAGTTTGCCAAATAGAACATATTGATTGGCCTGAATCGCGC AGCCACTTAGCCCAAGAATCCCTTGTGGTGAGCGTATATAACAGGTCCGTGGCAGTAGTGAGCGATAGGCTCCACGCGCT CATCATCGGCGGGCGATACGGGGCCGTGCCAGTAATCGCTGATCGCGTCGAGGAGGATAAATTGCATGCGACTCTCGACA GTCTTCTTATGCCGCAGTCGGTGTGGCTGCATGGCGGACGGCGGCCGGAGGGGGCACAGTCAAAGCTGGACTTGACGGTT CGAGAGAGAGAACGTATTGCTTCAGCCTTTGCGAGCGCCGCCACGTCGCTGGAAGCTCCTCTTGCCAGCCTCGTCGAAAA GCTCGATAGTTAG
Upstream 100 bases:
>100_bases CAGCGCTTGCACTTAGCTTTGCTGGTCAACTCATCCTCCAAGTCATTGCGATGGCCATTCTCACTAGGAGCCAAGAGGCT TGAAATCAAGAAGAGCGTTT
Downstream 100 bases:
>100_bases CGGTGAACCGTCCTGGGACTGGTGGAGATCGTGATCGCACCAGGGGGATGTGCTGCGCCGAGGAATTTCGACAACTCCGA TGCCGGAAGTCAGTACACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSIAAAEGNLGDLFIRRTVTRLVQAKGHEAVLYTGKMGKSYVDAFELPPNWVATPSPMRFLKMLAASCFQRRAVIVMAPA PARLDAKISAVGKRLGVALLIALSSALGNHVAVMGRAIRGSGFLALCGEKLIARCSSLYIARDKQTVLIAGGRAQFKPDL GFAAISLRIKAESTLRPTRNIVALSLRYTPDTKTVRNFVSEMQSAGFKVVTVTQVQQDRALNDEIARVCQIEHIDWPESR SHLAQESLVVSVYNRSVAVVSDRLHALIIGGRYGAVPVIADRVEEDKLHATLDSLLMPQSVWLHGGRRPEGAQSKLDLTV RERERIASAFASAATSLEAPLASLVEKLDS
Sequences:
>Translated_350_residues MSIAAAEGNLGDLFIRRTVTRLVQAKGHEAVLYTGKMGKSYVDAFELPPNWVATPSPMRFLKMLAASCFQRRAVIVMAPA PARLDAKISAVGKRLGVALLIALSSALGNHVAVMGRAIRGSGFLALCGEKLIARCSSLYIARDKQTVLIAGGRAQFKPDL GFAAISLRIKAESTLRPTRNIVALSLRYTPDTKTVRNFVSEMQSAGFKVVTVTQVQQDRALNDEIARVCQIEHIDWPESR SHLAQESLVVSVYNRSVAVVSDRLHALIIGGRYGAVPVIADRVEEDKLHATLDSLLMPQSVWLHGGRRPEGAQSKLDLTV RERERIASAFASAATSLEAPLASLVEKLDS >Mature_349_residues SIAAAEGNLGDLFIRRTVTRLVQAKGHEAVLYTGKMGKSYVDAFELPPNWVATPSPMRFLKMLAASCFQRRAVIVMAPAP ARLDAKISAVGKRLGVALLIALSSALGNHVAVMGRAIRGSGFLALCGEKLIARCSSLYIARDKQTVLIAGGRAQFKPDLG FAAISLRIKAESTLRPTRNIVALSLRYTPDTKTVRNFVSEMQSAGFKVVTVTQVQQDRALNDEIARVCQIEHIDWPESRS HLAQESLVVSVYNRSVAVVSDRLHALIIGGRYGAVPVIADRVEEDKLHATLDSLLMPQSVWLHGGRRPEGAQSKLDLTVR ERERIASAFASAATSLEAPLASLVEKLDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37978; Mature: 37846
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAAAEGNLGDLFIRRTVTRLVQAKGHEAVLYTGKMGKSYVDAFELPPNWVATPSPMRF CCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCHHHH LKMLAASCFQRRAVIVMAPAPARLDAKISAVGKRLGVALLIALSSALGNHVAVMGRAIRG HHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC SGFLALCGEKLIARCSSLYIARDKQTVLIAGGRAQFKPDLGFAAISLRIKAESTLRPTRN CCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCC IVALSLRYTPDTKTVRNFVSEMQSAGFKVVTVTQVQQDRALNDEIARVCQIEHIDWPESR EEEEEEEECCCHHHHHHHHHHHHHCCEEEEEEEECHHHCCHHHHHHHHHHHCCCCCCCHH SHLAQESLVVSVYNRSVAVVSDRLHALIIGGRYGAVPVIADRVEEDKLHATLDSLLMPQS HHHHHHHHEEEECCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCH VWLHGGRRPEGAQSKLDLTVRERERIASAFASAATSLEAPLASLVEKLDS HHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIAAAEGNLGDLFIRRTVTRLVQAKGHEAVLYTGKMGKSYVDAFELPPNWVATPSPMRF CEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCHHHH LKMLAASCFQRRAVIVMAPAPARLDAKISAVGKRLGVALLIALSSALGNHVAVMGRAIRG HHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC SGFLALCGEKLIARCSSLYIARDKQTVLIAGGRAQFKPDLGFAAISLRIKAESTLRPTRN CCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCC IVALSLRYTPDTKTVRNFVSEMQSAGFKVVTVTQVQQDRALNDEIARVCQIEHIDWPESR EEEEEEEECCCHHHHHHHHHHHHHCCEEEEEEEECHHHCCHHHHHHHHHHHCCCCCCCHH SHLAQESLVVSVYNRSVAVVSDRLHALIIGGRYGAVPVIADRVEEDKLHATLDSLLMPQS HHHHHHHHEEEECCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCH VWLHGGRRPEGAQSKLDLTVRERERIASAFASAATSLEAPLASLVEKLDS HHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA