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The map label for this gene is 108797910

Identifier: 108797910

GI number: 108797910

Start: 1032122

End: 1032442

Strand: Direct

Name: 108797910

Synonym: Mmcs_0936

Alternate gene names: NA

Gene position: 1032122-1032442 (Clockwise)

Preceding gene: 108797909

Following gene: 108797913

Centisome position: 18.09

GC content: 61.37

Gene sequence:

>321_bases
GTGATCGCACCAGGGGGATGTGCTGCGCCGAGGAATTTCGACAACTCCGATGCCGGAAGTCAGTACACTTCACTGGCGTT
CACCGAAGCGCTGCGTGACTCTGGCATCGCCGGCTCGATCGGCTCAGTCGGCGACGCGCTGCACAACGCACTGATGAAAT
CGGCCATCGGCCTCTACAAGACCGAGCTGATCGACGCCAGGAATCCTGGACCCGACGAGGCGAGGTTGAGCGCGAAACCG
CCACCTGGGGAGGAATTGTCAATACCTGTGGATCGGCGTGTTTCAGGCGACCTCCGTTCCGGCTTGCTGATCGCCGTCTG
A

Upstream 100 bases:

>100_bases
AGCCTTTGCGAGCGCCGCCACGTCGCTGGAAGCTCCTCTTGCCAGCCTCGTCGAAAAGCTCGATAGTTAGCGGTGAACCG
TCCTGGGACTGGTGGAGATC

Downstream 100 bases:

>100_bases
GGGCGGTGTCGGTGGGGTGATTTCGGTGGGGCGTTCGAGCAGTTTGCCCTTGTGGAAGACCGCGCCGGCGCGGACCAGGG
CGACCAGGTGTGGTGCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Domain-Containing Protein; Integrase Catalytic Subunit; Integrase Component; ISMsm1 Transposase OrfB

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MIAPGGCAAPRNFDNSDAGSQYTSLAFTEALRDSGIAGSIGSVGDALHNALMKSAIGLYKTELIDARNPGPDEARLSAKP
PPGEELSIPVDRRVSGDLRSGLLIAV

Sequences:

>Translated_106_residues
MIAPGGCAAPRNFDNSDAGSQYTSLAFTEALRDSGIAGSIGSVGDALHNALMKSAIGLYKTELIDARNPGPDEARLSAKP
PPGEELSIPVDRRVSGDLRSGLLIAV
>Mature_106_residues
MIAPGGCAAPRNFDNSDAGSQYTSLAFTEALRDSGIAGSIGSVGDALHNALMKSAIGLYKTELIDARNPGPDEARLSAKP
PPGEELSIPVDRRVSGDLRSGLLIAV

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10921; Mature: 10921

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAPGGCAAPRNFDNSDAGSQYTSLAFTEALRDSGIAGSIGSVGDALHNALMKSAIGLYK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
TELIDARNPGPDEARLSAKPPPGEELSIPVDRRVSGDLRSGLLIAV
HHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MIAPGGCAAPRNFDNSDAGSQYTSLAFTEALRDSGIAGSIGSVGDALHNALMKSAIGLYK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
TELIDARNPGPDEARLSAKPPPGEELSIPVDRRVSGDLRSGLLIAV
HHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA