Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797907
Identifier: 108797907
GI number: 108797907
Start: 1028167
End: 1029579
Strand: Direct
Name: 108797907
Synonym: Mmcs_0933
Alternate gene names: NA
Gene position: 1028167-1029579 (Clockwise)
Preceding gene: 108797905
Following gene: 108797908
Centisome position: 18.02
GC content: 56.05
Gene sequence:
>1413_bases ATGTATCGGCTGATCTGCGCACTGCTCGTCATCGCGGTCGTTGGTACCGGTTGTAGCGCGGAGTCAACAGTTTCGGCGCA GTGCTCAGCGACTGCACCGGTCGCGGGCAATGCGAGCTCCGTCGATTCCTCGGCGGGCAAGGGGGGTGGGGCCAAGTTGA ATGGCCCCCAACCCGCATTCGATCCCGCGAGAGTGATCTTGCCATCGGCTCTGTATATGGTGGCCGGCGAGACGTACCGT TTGGAATACGCGAGGATAATTGCTTCATTCGAACCAAACATGGATGTGACGATATCTGGGCACGAGCGAGCTGCCACGAC TTGCCCAACCTACTGGGAATACACACCGCGAGGTGCCGAATCCTTTCCGCTATCCATTGTTGTGAAAAATGGCGATGGGG AAACCGTACTATCAGAATCGCGGCATGTTGTCGTCTCGGCACGGCCCTCAGGCGGTGATCTGCGACACCTCAGTATCGGG GACTCGATTACGCGTGCCGGCGGGTATGCCGACATGGCGGTTAGGACGATACTGGGCGGCCAGACAGTCGGTACTCGTAC ATACGACGGAACATATTTTGGAGAGGGCCGTGGTGGCTGGACGGTCAAGAACTACATGAACCGAGTCGGTGACCCCGCGA AGGGCGACTCGCCATTCTTATTTCCCGTCGGTGTCGACGGGGGGAAGTACCTCGGCAACACCTCCTTCTGGCGAGATGTC ACCGTAGGAAATTCCGAGGGGTACGACTTCAGGGGATTTCAAGCGATAGCGCGAGGCTGGAAGGGTGATGGACCGTACCT GTTCGATTCGAATGGATACCCGAGGTCACCCACGGCGGGCGATGTAGTCATAGACCCTTCGCAAGCCGACGGAACACAGT GGAGAAAGTTCAGCGGCTCCACATGGATGGTTTTGGAACCCGAGCCTGACATCGAGTTTTCATTCGCAAAGTACCTGGAT CGGTTCGCATCCGCGTATTCCGCGGGACTTCCCACCGCTATCAGCATAATGTTGGGCACGGTCGATTTTTTGTCGTCACT AACTGACGAGTCATGGTCGGCGTACAGGGCGGGCATCGACACTCTTATCGAGTCCATCCGAACGTGGGACGAAGACGTCC CAATTATAATTATCGCCCCACCGAGCGGTGGCCCAGAAGAGATGTGGGCCGATCGAAAGGTAACCGGCGCAGAGTTTAAC CAACGCATGATCGAACACTCGCGTCGTCTTTTCGCGGCATACGACACCCCAGAAAAACATGCAAATAATATCTATACTAT TTCGTTCTTGGGTACTGTTTCCGCCGAGAATATGGCTGACTACGTTCATCCCAAAGATCCAGACGGGCACAAGCAAATGG CACCCTGGATGGCGGGCATGCTGGCGCACCTAATATCAGAAGGTTCGATATGA
Upstream 100 bases:
>100_bases GGGATCGGACTACAAAGCTTCAGTGGGCCGCGCAAGCGCCATGCGCTGGTGAACACCGTTTCGTGTAGTTTGCCAGTGAT GCCTAAATACGGGGGGATCG
Downstream 100 bases:
>100_bases TCGGGAACCTATCCCTGCGGCCGGTAGGATTGCCAACGCATGGGCTAAGTGCACGATCTGCTGAGTTAGTTGGAACATCG ATCCGCGAGGTTACCGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MYRLICALLVIAVVGTGCSAESTVSAQCSATAPVAGNASSVDSSAGKGGGAKLNGPQPAFDPARVILPSALYMVAGETYR LEYARIIASFEPNMDVTISGHERAATTCPTYWEYTPRGAESFPLSIVVKNGDGETVLSESRHVVVSARPSGGDLRHLSIG DSITRAGGYADMAVRTILGGQTVGTRTYDGTYFGEGRGGWTVKNYMNRVGDPAKGDSPFLFPVGVDGGKYLGNTSFWRDV TVGNSEGYDFRGFQAIARGWKGDGPYLFDSNGYPRSPTAGDVVIDPSQADGTQWRKFSGSTWMVLEPEPDIEFSFAKYLD RFASAYSAGLPTAISIMLGTVDFLSSLTDESWSAYRAGIDTLIESIRTWDEDVPIIIIAPPSGGPEEMWADRKVTGAEFN QRMIEHSRRLFAAYDTPEKHANNIYTISFLGTVSAENMADYVHPKDPDGHKQMAPWMAGMLAHLISEGSI
Sequences:
>Translated_470_residues MYRLICALLVIAVVGTGCSAESTVSAQCSATAPVAGNASSVDSSAGKGGGAKLNGPQPAFDPARVILPSALYMVAGETYR LEYARIIASFEPNMDVTISGHERAATTCPTYWEYTPRGAESFPLSIVVKNGDGETVLSESRHVVVSARPSGGDLRHLSIG DSITRAGGYADMAVRTILGGQTVGTRTYDGTYFGEGRGGWTVKNYMNRVGDPAKGDSPFLFPVGVDGGKYLGNTSFWRDV TVGNSEGYDFRGFQAIARGWKGDGPYLFDSNGYPRSPTAGDVVIDPSQADGTQWRKFSGSTWMVLEPEPDIEFSFAKYLD RFASAYSAGLPTAISIMLGTVDFLSSLTDESWSAYRAGIDTLIESIRTWDEDVPIIIIAPPSGGPEEMWADRKVTGAEFN QRMIEHSRRLFAAYDTPEKHANNIYTISFLGTVSAENMADYVHPKDPDGHKQMAPWMAGMLAHLISEGSI >Mature_470_residues MYRLICALLVIAVVGTGCSAESTVSAQCSATAPVAGNASSVDSSAGKGGGAKLNGPQPAFDPARVILPSALYMVAGETYR LEYARIIASFEPNMDVTISGHERAATTCPTYWEYTPRGAESFPLSIVVKNGDGETVLSESRHVVVSARPSGGDLRHLSIG DSITRAGGYADMAVRTILGGQTVGTRTYDGTYFGEGRGGWTVKNYMNRVGDPAKGDSPFLFPVGVDGGKYLGNTSFWRDV TVGNSEGYDFRGFQAIARGWKGDGPYLFDSNGYPRSPTAGDVVIDPSQADGTQWRKFSGSTWMVLEPEPDIEFSFAKYLD RFASAYSAGLPTAISIMLGTVDFLSSLTDESWSAYRAGIDTLIESIRTWDEDVPIIIIAPPSGGPEEMWADRKVTGAEFN QRMIEHSRRLFAAYDTPEKHANNIYTISFLGTVSAENMADYVHPKDPDGHKQMAPWMAGMLAHLISEGSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50613; Mature: 50613
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRLICALLVIAVVGTGCSAESTVSAQCSATAPVAGNASSVDSSAGKGGGAKLNGPQPAF CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DPARVILPSALYMVAGETYRLEYARIIASFEPNMDVTISGHERAATTCPTYWEYTPRGAE CCHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC SFPLSIVVKNGDGETVLSESRHVVVSARPSGGDLRHLSIGDSITRAGGYADMAVRTILGG CCCEEEEEECCCCCEEECCCCEEEEEECCCCCCEEEEECCCCHHHCCCHHHHHHHHHHCC QTVGTRTYDGTYFGEGRGGWTVKNYMNRVGDPAKGDSPFLFPVGVDGGKYLGNTSFWRDV CCCCCEECCCEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEE TVGNSEGYDFRGFQAIARGWKGDGPYLFDSNGYPRSPTAGDVVIDPSQADGTQWRKFSGS ECCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCHHEEECCC TWMVLEPEPDIEFSFAKYLDRFASAYSAGLPTAISIMLGTVDFLSSLTDESWSAYRAGID EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TLIESIRTWDEDVPIIIIAPPSGGPEEMWADRKVTGAEFNQRMIEHSRRLFAAYDTPEKH HHHHHHHCCCCCCCEEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHEEEEEECCCHHH ANNIYTISFLGTVSAENMADYVHPKDPDGHKQMAPWMAGMLAHLISEGSI CCCEEEEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYRLICALLVIAVVGTGCSAESTVSAQCSATAPVAGNASSVDSSAGKGGGAKLNGPQPAF CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DPARVILPSALYMVAGETYRLEYARIIASFEPNMDVTISGHERAATTCPTYWEYTPRGAE CCHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC SFPLSIVVKNGDGETVLSESRHVVVSARPSGGDLRHLSIGDSITRAGGYADMAVRTILGG CCCEEEEEECCCCCEEECCCCEEEEEECCCCCCEEEEECCCCHHHCCCHHHHHHHHHHCC QTVGTRTYDGTYFGEGRGGWTVKNYMNRVGDPAKGDSPFLFPVGVDGGKYLGNTSFWRDV CCCCCEECCCEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEE TVGNSEGYDFRGFQAIARGWKGDGPYLFDSNGYPRSPTAGDVVIDPSQADGTQWRKFSGS ECCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCHHEEECCC TWMVLEPEPDIEFSFAKYLDRFASAYSAGLPTAISIMLGTVDFLSSLTDESWSAYRAGID EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TLIESIRTWDEDVPIIIIAPPSGGPEEMWADRKVTGAEFNQRMIEHSRRLFAAYDTPEKH HHHHHHHCCCCCCCEEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHEEEEEECCCHHH ANNIYTISFLGTVSAENMADYVHPKDPDGHKQMAPWMAGMLAHLISEGSI CCCEEEEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA