| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797839
Identifier: 108797839
GI number: 108797839
Start: 958314
End: 959012
Strand: Reverse
Name: 108797839
Synonym: Mmcs_0864
Alternate gene names: NA
Gene position: 959012-958314 (Counterclockwise)
Preceding gene: 108797840
Following gene: 108797838
Centisome position: 16.81
GC content: 67.67
Gene sequence:
>699_bases GTGACCTCTCCGTCCACCGAACATGACGCGGACTTCGCCGCGTTCTCAGAGCTCCCCCAGGTCGACCAGAACGCCCGTCC CCCGCACCAGCGCAGGCCGCGCTTCGACGGCGACGTCTCCGAACTCCCCGACCGCGCCTGCTGGGCGCTGCAGAACCTGC TCACCCGCCGCTACATCAGCGCCGAGACCGACAGCGACCTGTTCAGCTGGGTGCTCGAATACCGCAGGCAACTCAGCGTG CGGCTCTCCGAACTCGACCTGATCCTTCGCATCGTCGACGGAACTGATGTGGCGTTCGTCGAACAGGCCCGCTACGAATC GGCAAGGGGCGCCAAGCTTCTGCGCCGCGAACCGCTGGGCACCTACGACTCGATCCTGGCGTTGCACCTGGCGCAGATGA TGCGGGCCGCGGGCGGGCAGAGCGTGCTCATCAGCCGCGAGGAGATGCACGGGTTGTTCTCCGGTGTGCTCAACGACACC GACCGCGACGCGGTCACGTTCACCGCGCGCATCGACGGCGCGATCGCGCGGCTGGCCGGGCTGGAGATCCTGCGCCGCAG CCGCGACGACGAGGACAGCTACACCATCAGCCCGGTGATCAACGCCGTCATGACGGCCTCGGTGATCACCGAACTGCAGC AGCAGTTCGAACAGCTGCTGGGCGGCGGCACGCCGGCCGAGGAGGTCCACGTTGACTGA
Upstream 100 bases:
>100_bases CCACCGTCCGGTTCCGCTCCCTCGACGGCCGTGACCGCGAAATCGCGGTGCCCGACCTGATGTTCACCGAACCGATCACC ACCCTCGCTGGAGTTTCGCA
Downstream 100 bases:
>100_bases ACAGTTTCACCTGTCGCGGCTGCAGGTCATCAACTGGGGCGTGTTCGACGGCTACCACTCGATCCCGTTCAGCGCCGGCG GCGCCCTGATCGCCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTSPSTEHDADFAAFSELPQVDQNARPPHQRRPRFDGDVSELPDRACWALQNLLTRRYISAETDSDLFSWVLEYRRQLSV RLSELDLILRIVDGTDVAFVEQARYESARGAKLLRREPLGTYDSILALHLAQMMRAAGGQSVLISREEMHGLFSGVLNDT DRDAVTFTARIDGAIARLAGLEILRRSRDDEDSYTISPVINAVMTASVITELQQQFEQLLGGGTPAEEVHVD
Sequences:
>Translated_232_residues MTSPSTEHDADFAAFSELPQVDQNARPPHQRRPRFDGDVSELPDRACWALQNLLTRRYISAETDSDLFSWVLEYRRQLSV RLSELDLILRIVDGTDVAFVEQARYESARGAKLLRREPLGTYDSILALHLAQMMRAAGGQSVLISREEMHGLFSGVLNDT DRDAVTFTARIDGAIARLAGLEILRRSRDDEDSYTISPVINAVMTASVITELQQQFEQLLGGGTPAEEVHVD >Mature_231_residues TSPSTEHDADFAAFSELPQVDQNARPPHQRRPRFDGDVSELPDRACWALQNLLTRRYISAETDSDLFSWVLEYRRQLSVR LSELDLILRIVDGTDVAFVEQARYESARGAKLLRREPLGTYDSILALHLAQMMRAAGGQSVLISREEMHGLFSGVLNDTD RDAVTFTARIDGAIARLAGLEILRRSRDDEDSYTISPVINAVMTASVITELQQQFEQLLGGGTPAEEVHVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25959; Mature: 25828
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPSTEHDADFAAFSELPQVDQNARPPHQRRPRFDGDVSELPDRACWALQNLLTRRYIS CCCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHC AETDSDLFSWVLEYRRQLSVRLSELDLILRIVDGTDVAFVEQARYESARGAKLLRREPLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC TYDSILALHLAQMMRAAGGQSVLISREEMHGLFSGVLNDTDRDAVTFTARIDGAIARLAG HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH LEILRRSRDDEDSYTISPVINAVMTASVITELQQQFEQLLGGGTPAEEVHVD HHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure TSPSTEHDADFAAFSELPQVDQNARPPHQRRPRFDGDVSELPDRACWALQNLLTRRYIS CCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHC AETDSDLFSWVLEYRRQLSVRLSELDLILRIVDGTDVAFVEQARYESARGAKLLRREPLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC TYDSILALHLAQMMRAAGGQSVLISREEMHGLFSGVLNDTDRDAVTFTARIDGAIARLAG HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH LEILRRSRDDEDSYTISPVINAVMTASVITELQQQFEQLLGGGTPAEEVHVD HHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA