| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797840
Identifier: 108797840
GI number: 108797840
Start: 959009
End: 960451
Strand: Reverse
Name: 108797840
Synonym: Mmcs_0865
Alternate gene names: NA
Gene position: 960451-959009 (Counterclockwise)
Preceding gene: 108797841
Following gene: 108797839
Centisome position: 16.83
GC content: 69.23
Gene sequence:
>1443_bases ATGCAGGTGGACGACAACAGGGGGCTGTCGGCGGCTGAGCTGCTCGAACTCAACCGCGACCTGCACGGATCCCGGGCGAT CCGGCTGCTGGCCACCCACAACCTCGGGCTCTACGCCACGCTCATGGAACGCCATCTGGCCGACGGCGTCGTCGCCGAAA CCGAGCTGGTGGTGCGGCTGGAGCGCGACCTGCACGAACTCGACCCCGACGGCCAGTCCGGGCTGGCGCTGATCAAGTCG TGGGCCAGCCAGGGCTGGTTGCACCGCATAGTCGACGAGCGCAGCGACCAGAACATCTGCTATCTCACCCAGGACGCCCG CCGCGCCCTGGACTTCCTCCGCGGGATGCGCCGCCAGGACACCATCGCGACCGGCGGCTCGATCAACGGCATCGCCTCGC GCCTCAAGCAGGTCGCGATCCGCGTCGGCAACGACCCCGCCCGCATCCGCAAGAGCATCGAAGCCGAGATCGCGGCGCTG CAGGCCGAACTCGACGACCTCGAGGCCGGCACCCGCCCGGAGCCGGATGTCACCGACGCCTACGACGAGGCCCGCGCGAT CGCCCTGCAGATGGAACGGCTCATCACCGACATCGGGCAATACGGATCGATGATCGAACAGGCCACCGCCGCGCTCGACG AGCCGATCGACAGCAACGCCGAGTACCGCGACCGGCAACGCCAGATGTACGCCGACTACCAGGCCGCGTGGGACTCGCAG GGCCGCGACAGCCACCGCGCATTCCTCCGGATGATCAACGACCCCGACCAGCGCGCCGAGTTCGAGGCCGATGTCGCCGC GGTCGCCGAGGCGCTGCCCCTGCTCGACCCGGCGCTGCGCAAGGTGATGGCCGGGTTCTTCGAACTCGTCGGCCACCAGA TCGACGAGGTCGAACGCATCCAGCAGCGCTGCGCCCAGCGGGTCAAGCGGTTCACCGCGTTCGGCACGCTCGAGCAGAGC CGCGGGGTGGCCCGTCAGCTCAACGACGCGATCGGCGCCGCCCGCGCCCTGCTGAAGACCTCGCTCACGGACTCGCGGCT GGGCATCGACGTGCCGCTGGCCCGCCACGCGATCAGCTCCGTCGGCGCGCTGAGTTTCAAGATCGGCGACTTGTCGGCGC CCAAACCCGCCAAACCCGCTGGGGGCGAAGTGGATCTGGCGACTTTCGCGGCGCTGACCACACAGGTCGACGCGCCCGCG ATGTCGGACATGCTCAACGCCGCGCTCCCGGTCTCCCTCTCCCGCGCCGTCGACATGCTGGACAACGCGTACCTGGGCCA CGTCATCGTGCTGTGGTCCTGGGCGCTCAAACAACCGAACGACGGGCGGCCGGCGTCGACCACCGTCCGGTTCCGCTCCC TCGACGGCCGTGACCGCGAAATCGCGGTGCCCGACCTGATGTTCACCGAACCGATCACCACCCTCGCTGGAGTTTCGCAG TGA
Upstream 100 bases:
>100_bases CCGCTGCCGTAGCGCCGCAACCCGGCACCGACGATGTCCCCGCCGTGGCCTATGTTGGGTCGTCCGGCAGGAACGGGGAC AGACGCGGACAGATCGAGGA
Downstream 100 bases:
>100_bases CCTCTCCGTCCACCGAACATGACGCGGACTTCGCCGCGTTCTCAGAGCTCCCCCAGGTCGACCAGAACGCCCGTCCCCCG CACCAGCGCAGGCCGCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MQVDDNRGLSAAELLELNRDLHGSRAIRLLATHNLGLYATLMERHLADGVVAETELVVRLERDLHELDPDGQSGLALIKS WASQGWLHRIVDERSDQNICYLTQDARRALDFLRGMRRQDTIATGGSINGIASRLKQVAIRVGNDPARIRKSIEAEIAAL QAELDDLEAGTRPEPDVTDAYDEARAIALQMERLITDIGQYGSMIEQATAALDEPIDSNAEYRDRQRQMYADYQAAWDSQ GRDSHRAFLRMINDPDQRAEFEADVAAVAEALPLLDPALRKVMAGFFELVGHQIDEVERIQQRCAQRVKRFTAFGTLEQS RGVARQLNDAIGAARALLKTSLTDSRLGIDVPLARHAISSVGALSFKIGDLSAPKPAKPAGGEVDLATFAALTTQVDAPA MSDMLNAALPVSLSRAVDMLDNAYLGHVIVLWSWALKQPNDGRPASTTVRFRSLDGRDREIAVPDLMFTEPITTLAGVSQ
Sequences:
>Translated_480_residues MQVDDNRGLSAAELLELNRDLHGSRAIRLLATHNLGLYATLMERHLADGVVAETELVVRLERDLHELDPDGQSGLALIKS WASQGWLHRIVDERSDQNICYLTQDARRALDFLRGMRRQDTIATGGSINGIASRLKQVAIRVGNDPARIRKSIEAEIAAL QAELDDLEAGTRPEPDVTDAYDEARAIALQMERLITDIGQYGSMIEQATAALDEPIDSNAEYRDRQRQMYADYQAAWDSQ GRDSHRAFLRMINDPDQRAEFEADVAAVAEALPLLDPALRKVMAGFFELVGHQIDEVERIQQRCAQRVKRFTAFGTLEQS RGVARQLNDAIGAARALLKTSLTDSRLGIDVPLARHAISSVGALSFKIGDLSAPKPAKPAGGEVDLATFAALTTQVDAPA MSDMLNAALPVSLSRAVDMLDNAYLGHVIVLWSWALKQPNDGRPASTTVRFRSLDGRDREIAVPDLMFTEPITTLAGVSQ >Mature_480_residues MQVDDNRGLSAAELLELNRDLHGSRAIRLLATHNLGLYATLMERHLADGVVAETELVVRLERDLHELDPDGQSGLALIKS WASQGWLHRIVDERSDQNICYLTQDARRALDFLRGMRRQDTIATGGSINGIASRLKQVAIRVGNDPARIRKSIEAEIAAL QAELDDLEAGTRPEPDVTDAYDEARAIALQMERLITDIGQYGSMIEQATAALDEPIDSNAEYRDRQRQMYADYQAAWDSQ GRDSHRAFLRMINDPDQRAEFEADVAAVAEALPLLDPALRKVMAGFFELVGHQIDEVERIQQRCAQRVKRFTAFGTLEQS RGVARQLNDAIGAARALLKTSLTDSRLGIDVPLARHAISSVGALSFKIGDLSAPKPAKPAGGEVDLATFAALTTQVDAPA MSDMLNAALPVSLSRAVDMLDNAYLGHVIVLWSWALKQPNDGRPASTTVRFRSLDGRDREIAVPDLMFTEPITTLAGVSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52748; Mature: 52748
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVDDNRGLSAAELLELNRDLHGSRAIRLLATHNLGLYATLMERHLADGVVAETELVVRL CCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHH ERDLHELDPDGQSGLALIKSWASQGWLHRIVDERSDQNICYLTQDARRALDFLRGMRRQD HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCHHC TIATGGSINGIASRLKQVAIRVGNDPARIRKSIEAEIAALQAELDDLEAGTRPEPDVTDA CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH YDEARAIALQMERLITDIGQYGSMIEQATAALDEPIDSNAEYRDRQRQMYADYQAAWDSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC GRDSHRAFLRMINDPDQRAEFEADVAAVAEALPLLDPALRKVMAGFFELVGHQIDEVERI CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQRCAQRVKRFTAFGTLEQSRGVARQLNDAIGAARALLKTSLTDSRLGIDVPLARHAISS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH VGALSFKIGDLSAPKPAKPAGGEVDLATFAALTTQVDAPAMSDMLNAALPVSLSRAVDML HCHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH DNAYLGHVIVLWSWALKQPNDGRPASTTVRFRSLDGRDREIAVPDLMFTEPITTLAGVSQ HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEECCCHHHHCHHHHHCCCCC >Mature Secondary Structure MQVDDNRGLSAAELLELNRDLHGSRAIRLLATHNLGLYATLMERHLADGVVAETELVVRL CCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHH ERDLHELDPDGQSGLALIKSWASQGWLHRIVDERSDQNICYLTQDARRALDFLRGMRRQD HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCHHC TIATGGSINGIASRLKQVAIRVGNDPARIRKSIEAEIAALQAELDDLEAGTRPEPDVTDA CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH YDEARAIALQMERLITDIGQYGSMIEQATAALDEPIDSNAEYRDRQRQMYADYQAAWDSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC GRDSHRAFLRMINDPDQRAEFEADVAAVAEALPLLDPALRKVMAGFFELVGHQIDEVERI CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQRCAQRVKRFTAFGTLEQSRGVARQLNDAIGAARALLKTSLTDSRLGIDVPLARHAISS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH VGALSFKIGDLSAPKPAKPAGGEVDLATFAALTTQVDAPAMSDMLNAALPVSLSRAVDML HCHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH DNAYLGHVIVLWSWALKQPNDGRPASTTVRFRSLDGRDREIAVPDLMFTEPITTLAGVSQ HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEECCCHHHHCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA