| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yflP [H]
Identifier: 108797830
GI number: 108797830
Start: 944215
End: 945183
Strand: Reverse
Name: yflP [H]
Synonym: Mmcs_0855
Alternate gene names: 108797830
Gene position: 945183-944215 (Counterclockwise)
Preceding gene: 108797831
Following gene: 108797829
Centisome position: 16.57
GC content: 67.8
Gene sequence:
>969_bases GTGATCAAATCCGCGCTGGGCGCGTTGCTGGCTGCCACGCTCGTGCTCACCGGTTGCCAGGACTCGAAACCGGCTGCCGC CACGCAGGACTACCCCTCGGGGCCGGTGACGATGACGGCGGGCGCCAATCCCGGCAGCGGGTTCGACATCACGATCCGCG CGGTCGTCGAGGCACTGCAGAAGGAGCGCCTCGTCGACGTCCCGCTGCCGGTGCAGAATCGGCCGGGCGGTATCGGAGCG CAATTCCTCGCCACCATGGTCGAGCAGTACCGGGGCAAGGACGACCAGGTGTCGGTCACCTCGCTGTCGATGATGATGAA CGAACTGCGCGGCCTCTCGGAGTACGGCTACACCGACGTCACGATGATCGCGTGCCTGATGACGGAGTACTACGTCGTCG TCACCGGCGCGGGGAGCCCGTACAAGAACCTGACCGACGTGATGGCCGCCGTGAAGGCCGACCCCGCCGTCCCGATCGGC GCCGCCACCGACGATCAGGCCCCCTTCGACCTGCTCGTAGCCGCGGCGGGTGGAGACCCGTCGACGATCAACTACGTGCC CTTCGAGGGCGGCGGCGACCAGAGCACCGCCCTGCGCAACGGCGAGATCCCCGTGGCGATCACGGGGATCAGCGAAGTCG TCGACCAGGTGAAGTCCGGAGAGTTCACCGCCCTCGGTGTGCTCTCCGAGGAGCCTCTGCCGAACCTCGACGTGCCCACC GCCCGCGAGCAGGGACTCGACGTCACGCTGTCCAACTGGCGCGGCCTCTACGGCCCACCGGACATGCCGCAGTTCGCGGT CGCTTACTGGCAGACGGCCCTCGGCGAGATGGTGCGGTCACCGACCTGGCAGCAGATCGCCGCGCGCAGCCACTTCACCA CCACCTTCATGACCGGTGACGAGTTCCAGACCTTCCTCGCCGAGACGCAGGAAGACGTCAAGACCGCCCTCGAGGAAGCG GGTCCCTGA
Upstream 100 bases:
>100_bases AGGGGCGCGCCGTCGCGGCGCGAGGACGAGCGCATCGCCGCCTGATCACTTAACGGCCAAAGCTCCCCCACCGGCGGCGA AATCGGTGTAGAGCTTCTTG
Downstream 100 bases:
>100_bases CCATTCGGTGAATGCGTCGCATCGCCGTCGGCCTGCGCCTACATTGTCAGCGGACGGGAGTGGCGCCGATGATTCCGAGC ATCAAGAGGTCGTTGCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MIKSALGALLAATLVLTGCQDSKPAAATQDYPSGPVTMTAGANPGSGFDITIRAVVEALQKERLVDVPLPVQNRPGGIGA QFLATMVEQYRGKDDQVSVTSLSMMMNELRGLSEYGYTDVTMIACLMTEYYVVVTGAGSPYKNLTDVMAAVKADPAVPIG AATDDQAPFDLLVAAAGGDPSTINYVPFEGGGDQSTALRNGEIPVAITGISEVVDQVKSGEFTALGVLSEEPLPNLDVPT AREQGLDVTLSNWRGLYGPPDMPQFAVAYWQTALGEMVRSPTWQQIAARSHFTTTFMTGDEFQTFLAETQEDVKTALEEA GP
Sequences:
>Translated_322_residues MIKSALGALLAATLVLTGCQDSKPAAATQDYPSGPVTMTAGANPGSGFDITIRAVVEALQKERLVDVPLPVQNRPGGIGA QFLATMVEQYRGKDDQVSVTSLSMMMNELRGLSEYGYTDVTMIACLMTEYYVVVTGAGSPYKNLTDVMAAVKADPAVPIG AATDDQAPFDLLVAAAGGDPSTINYVPFEGGGDQSTALRNGEIPVAITGISEVVDQVKSGEFTALGVLSEEPLPNLDVPT AREQGLDVTLSNWRGLYGPPDMPQFAVAYWQTALGEMVRSPTWQQIAARSHFTTTFMTGDEFQTFLAETQEDVKTALEEA GP >Mature_322_residues MIKSALGALLAATLVLTGCQDSKPAAATQDYPSGPVTMTAGANPGSGFDITIRAVVEALQKERLVDVPLPVQNRPGGIGA QFLATMVEQYRGKDDQVSVTSLSMMMNELRGLSEYGYTDVTMIACLMTEYYVVVTGAGSPYKNLTDVMAAVKADPAVPIG AATDDQAPFDLLVAAAGGDPSTINYVPFEGGGDQSTALRNGEIPVAITGISEVVDQVKSGEFTALGVLSEEPLPNLDVPT AREQGLDVTLSNWRGLYGPPDMPQFAVAYWQTALGEMVRSPTWQQIAARSHFTTTFMTGDEFQTFLAETQEDVKTALEEA GP
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34097; Mature: 34097
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSALGALLAATLVLTGCQDSKPAAATQDYPSGPVTMTAGANPGSGFDITIRAVVEALQ CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHH KERLVDVPLPVQNRPGGIGAQFLATMVEQYRGKDDQVSVTSLSMMMNELRGLSEYGYTDV HCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH TMIACLMTEYYVVVTGAGSPYKNLTDVMAAVKADPAVPIGAATDDQAPFDLLVAAAGGDP HHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCC STINYVPFEGGGDQSTALRNGEIPVAITGISEVVDQVKSGEFTALGVLSEEPLPNLDVPT CEEEEECCCCCCCCCCEEECCCCCEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC AREQGLDVTLSNWRGLYGPPDMPQFAVAYWQTALGEMVRSPTWQQIAARSHFTTTFMTGD CHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCH EFQTFLAETQEDVKTALEEAGP HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKSALGALLAATLVLTGCQDSKPAAATQDYPSGPVTMTAGANPGSGFDITIRAVVEALQ CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHH KERLVDVPLPVQNRPGGIGAQFLATMVEQYRGKDDQVSVTSLSMMMNELRGLSEYGYTDV HCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH TMIACLMTEYYVVVTGAGSPYKNLTDVMAAVKADPAVPIGAATDDQAPFDLLVAAAGGDP HHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCC STINYVPFEGGGDQSTALRNGEIPVAITGISEVVDQVKSGEFTALGVLSEEPLPNLDVPT CEEEEECCCCCCCCCCEEECCCCCEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC AREQGLDVTLSNWRGLYGPPDMPQFAVAYWQTALGEMVRSPTWQQIAARSHFTTTFMTGD CHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCH EFQTFLAETQEDVKTALEEAGP HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]