| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is acr1 [H]
Identifier: 108797711
GI number: 108797711
Start: 778801
End: 779676
Strand: Reverse
Name: acr1 [H]
Synonym: Mmcs_0732
Alternate gene names: 108797711
Gene position: 779676-778801 (Counterclockwise)
Preceding gene: 108797714
Following gene: 108797710
Centisome position: 13.67
GC content: 70.78
Gene sequence:
>876_bases GTGAGCAAGAATCCGTTGCGTCGGCTGTCGGACAGCCTGATGCTGACGAGCATGCGGCCGTCGATGGCCGAACAGTTCCT GCAACCGCGCGCGGACGTCGACCTCACCGGTAAGCGCATCCTGCTGACCGGCGCCTCGTCGGGTATCGGCGAGGCCGCCG CGGAGAAGTTCGCCCGGCGCGGCGCCACGGTCGTCGCGGTGGCCCGCCGCCAGGATCTGCTCGACGCACTGGTCGGCCGG ATCTCCGAGGCCGGTGGCGTCGCCGCGGCCCGGGCGTGCGACCTGTCCGACCTCGACGCCGTCGACGAGCTGGTGGCCGA CGTGGAGGAGCGGTTCGGCGGCGTCGACATCCTGATCAACAACGCGGGCAAGTCAATTCGCCGTCCGCTGGCCGAATCGC TGGACCGCTGGCACGACGTCGAGCGGACGATGACGCTGAACTACTACTCGCCGCTGCGGCTGATCCGCGGGCTGGCGCCG GGCATGATCGCCCGCGGCGAGGGCCACATCATCAACGTCGCGACGTGGGGCGTGTTCAGCGAGGCCTCCCCGCTGTTCGG GGTCTACGTCGCCTCGAAGGCGGCGCTGTCGGCGGTGAGCCGGGTCATCGAGACCGAATGGGCCGACAAGAGCGTGCACT CCTCAACGCTCTACTACCCGCTGGTGAAGACGCCGATGATCGCGCCCACGAGGGAGTACGACCGGGTGCCGGGGCTGAGC CCGCAGGAAGCCGCCGACTGGATGATCGCCGCGGCGCGCCACCGGCCGGTGCGGATCGCGCCCCGGATGGCCGTCACCGC GCGGGCCGTCGACTCGCTGGCGCCGACGTGGTTCAACGCCATCGTCAAGCGGCAGCAGTTCCAGCCGGGGGCCTGA
Upstream 100 bases:
>100_bases GGTGGCATCACCGGTGACGGCGTCGCCCCGGAGCAGTACCTCGACAGCGTCGGCCAGCGCCATGCATCAGCACTATAGGC GGCGCGCCTAGACTCCCGGC
Downstream 100 bases:
>100_bases CCGCCGTGATAGACACAAGCCATGGAGATCCTGGCCAGCCGGATGCTGCTGCGGCCGGCGGACTATCAACGGTCGCTGCG GTTCTACCGCGACGGGCTCG
Product: short chain dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSKNPLRRLSDSLMLTSMRPSMAEQFLQPRADVDLTGKRILLTGASSGIGEAAAEKFARRGATVVAVARRQDLLDALVGR ISEAGGVAAARACDLSDLDAVDELVADVEERFGGVDILINNAGKSIRRPLAESLDRWHDVERTMTLNYYSPLRLIRGLAP GMIARGEGHIINVATWGVFSEASPLFGVYVASKAALSAVSRVIETEWADKSVHSSTLYYPLVKTPMIAPTREYDRVPGLS PQEAADWMIAAARHRPVRIAPRMAVTARAVDSLAPTWFNAIVKRQQFQPGA
Sequences:
>Translated_291_residues MSKNPLRRLSDSLMLTSMRPSMAEQFLQPRADVDLTGKRILLTGASSGIGEAAAEKFARRGATVVAVARRQDLLDALVGR ISEAGGVAAARACDLSDLDAVDELVADVEERFGGVDILINNAGKSIRRPLAESLDRWHDVERTMTLNYYSPLRLIRGLAP GMIARGEGHIINVATWGVFSEASPLFGVYVASKAALSAVSRVIETEWADKSVHSSTLYYPLVKTPMIAPTREYDRVPGLS PQEAADWMIAAARHRPVRIAPRMAVTARAVDSLAPTWFNAIVKRQQFQPGA >Mature_290_residues SKNPLRRLSDSLMLTSMRPSMAEQFLQPRADVDLTGKRILLTGASSGIGEAAAEKFARRGATVVAVARRQDLLDALVGRI SEAGGVAAARACDLSDLDAVDELVADVEERFGGVDILINNAGKSIRRPLAESLDRWHDVERTMTLNYYSPLRLIRGLAPG MIARGEGHIINVATWGVFSEASPLFGVYVASKAALSAVSRVIETEWADKSVHSSTLYYPLVKTPMIAPTREYDRVPGLSP QEAADWMIAAARHRPVRIAPRMAVTARAVDSLAPTWFNAIVKRQQFQPGA
Specific function: Catalyzes the NADPH-dependent reduction of long chain acyl-CoA to the corresponding aldehyde [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI20149619, Length=266, Percent_Identity=30.8270676691729, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI32483357, Length=191, Percent_Identity=29.8429319371728, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI7706318, Length=206, Percent_Identity=33.0097087378641, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI33667109, Length=186, Percent_Identity=31.7204301075269, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI5031737, Length=192, Percent_Identity=31.25, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI126723191, Length=189, Percent_Identity=30.6878306878307, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI7705925, Length=193, Percent_Identity=32.1243523316062, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI32455239, Length=182, Percent_Identity=31.8681318681319, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI5031765, Length=182, Percent_Identity=31.8681318681319, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI157739938, Length=274, Percent_Identity=27.007299270073, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI40807363, Length=256, Percent_Identity=26.953125, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI226371731, Length=223, Percent_Identity=27.8026905829596, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI7705855, Length=196, Percent_Identity=27.5510204081633, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI4557649, Length=187, Percent_Identity=26.7379679144385, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI4503817, Length=203, Percent_Identity=29.064039408867, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI210032110, Length=182, Percent_Identity=26.3736263736264, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1787820, Length=244, Percent_Identity=27.4590163934426, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87082100, Length=195, Percent_Identity=30.2564102564103, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787335, Length=199, Percent_Identity=29.6482412060301, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1787905, Length=142, Percent_Identity=33.8028169014084, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789208, Length=186, Percent_Identity=30.1075268817204, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1790717, Length=194, Percent_Identity=26.8041237113402, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1786701, Length=272, Percent_Identity=28.6764705882353, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17564282, Length=255, Percent_Identity=27.843137254902, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17567345, Length=212, Percent_Identity=28.3018867924528, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17544670, Length=220, Percent_Identity=33.1818181818182, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17563726, Length=203, Percent_Identity=26.6009852216749, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17508895, Length=241, Percent_Identity=27.8008298755187, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17560150, Length=171, Percent_Identity=29.2397660818713, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193204405, Length=172, Percent_Identity=34.3023255813954, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562904, Length=199, Percent_Identity=26.6331658291457, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17538480, Length=256, Percent_Identity=27.34375, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17562990, Length=197, Percent_Identity=27.9187817258883, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17562906, Length=172, Percent_Identity=33.7209302325581, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17562910, Length=241, Percent_Identity=27.8008298755187, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI72000259, Length=176, Percent_Identity=30.1136363636364, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI193203115, Length=248, Percent_Identity=26.2096774193548, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193203117, Length=249, Percent_Identity=25.7028112449799, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115534694, Length=199, Percent_Identity=29.1457286432161, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI25152911, Length=195, Percent_Identity=30.2564102564103, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17562908, Length=173, Percent_Identity=32.3699421965318, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17560332, Length=205, Percent_Identity=26.8292682926829, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17560220, Length=173, Percent_Identity=32.9479768786127, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17559104, Length=196, Percent_Identity=29.0816326530612, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17538486, Length=223, Percent_Identity=26.457399103139, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17565030, Length=168, Percent_Identity=32.1428571428571, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17551412, Length=199, Percent_Identity=26.6331658291457, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=197, Percent_Identity=25.3807106598985, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI21358495, Length=280, Percent_Identity=30, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI24584744, Length=238, Percent_Identity=32.7731092436975, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI28574402, Length=238, Percent_Identity=32.7731092436975, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24640492, Length=256, Percent_Identity=25.78125, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI161076933, Length=219, Percent_Identity=29.2237442922374, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24584748, Length=219, Percent_Identity=29.2237442922374, Blast_Score=78, Evalue=9e-15, Organism=Drosophila melanogaster, GI24640442, Length=205, Percent_Identity=30.7317073170732, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI21356301, Length=210, Percent_Identity=29.0476190476191, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24648944, Length=174, Percent_Identity=31.6091954022989, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI281364892, Length=248, Percent_Identity=23.7903225806452, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI116007236, Length=220, Percent_Identity=29.0909090909091, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357041, Length=195, Percent_Identity=31.2820512820513, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24643142, Length=196, Percent_Identity=31.6326530612245, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24581726, Length=240, Percent_Identity=27.9166666666667, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI116007238, Length=178, Percent_Identity=30.8988764044944, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28571526, Length=181, Percent_Identity=33.1491712707182, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007234, Length=84, Percent_Identity=45.2380952380952, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI116007232, Length=84, Percent_Identity=45.2380952380952, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI23397609, Length=193, Percent_Identity=31.0880829015544, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 31650; Mature: 31518
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNPLRRLSDSLMLTSMRPSMAEQFLQPRADVDLTGKRILLTGASSGIGEAAAEKFARR CCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHC GATVVAVARRQDLLDALVGRISEAGGVAAARACDLSDLDAVDELVADVEERFGGVDILIN CCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEE NAGKSIRRPLAESLDRWHDVERTMTLNYYSPLRLIRGLAPGMIARGEGHIINVATWGVFS CCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCC EASPLFGVYVASKAALSAVSRVIETEWADKSVHSSTLYYPLVKTPMIAPTREYDRVPGLS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCCCHHHHCCCCCC PQEAADWMIAAARHRPVRIAPRMAVTARAVDSLAPTWFNAIVKRQQFQPGA HHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SKNPLRRLSDSLMLTSMRPSMAEQFLQPRADVDLTGKRILLTGASSGIGEAAAEKFARR CCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHC GATVVAVARRQDLLDALVGRISEAGGVAAARACDLSDLDAVDELVADVEERFGGVDILIN CCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEE NAGKSIRRPLAESLDRWHDVERTMTLNYYSPLRLIRGLAPGMIARGEGHIINVATWGVFS CCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCC EASPLFGVYVASKAALSAVSRVIETEWADKSVHSSTLYYPLVKTPMIAPTREYDRVPGLS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCCCHHHHCCCCCC PQEAADWMIAAARHRPVRIAPRMAVTARAVDSLAPTWFNAIVKRQQFQPGA HHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA