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The map label for this gene is psd [H]

Identifier: 108797574

GI number: 108797574

Start: 654239

End: 654997

Strand: Reverse

Name: psd [H]

Synonym: Mmcs_0594

Alternate gene names: 108797574

Gene position: 654997-654239 (Counterclockwise)

Preceding gene: 108797575

Following gene: 108797573

Centisome position: 11.48

GC content: 72.2

Gene sequence:

>759_bases
ATGGGACCTGAGCTAGCCTGCCCGACACCCCACGCACGTAGAATCCAGCCGATGGCCAGACGCCCCAGCACCGATGACCT
GAGATCCGGCCCAGAGCGGTTCATGGCGCTGGTGAAAACCACCGTCCCGCCGGTACACCCCGCCGGCCTGCCGTTCATCG
GCGCCGGCCTCGCGCTGGCGGCCGCGGGCCGCCGCAACCGGTGGGTGCGCGGCGCGGGCCTGGTCGCCGCCGGCGCCAAC
GCCGCCTTCTTCCGGCATCCGCCGCGCGTGCCACCGACCCGCCCCGGTGTGGTGGTCGCCCCCGCCGACGGCCTGATCTG
CCTGGTCGAGGACGCCGAACCGCCCGCCGAACTCAACCTGCCGGCCCGGCCCGTGCCGCGGGTGAGCATCTTCCTGTCGA
TCTTCGACGCCCATGTGCAGCGGATCCCCATCAGCGGTGAGGTGGTCGCCGTCGAACACCGGCCCGGTCTGTTCGGATCC
GCCGAGCTGGCGGCCGCCAGCGAGGACAACGAACGCAACAGCGTGGTGATCCGCACCGACACCGGCGCACAGGTGATCGC
GGTGCAGATCGCGGGCCTGGTCGCCCGCCGCATCGTCTGCGACCTCACCACCGGCGACAAGGTGACCATCGGCGACACCT
ACGGGCTGATCCGCTACGGCTCCCGGCTGGACACCTACCTGCCCGAAGGCACCGACATCCAGGTGCTGCCGGGCCAGCGC
GCGGTGGGCGGCGAGACGATCCTGGCGGAGCTGCCGTGA

Upstream 100 bases:

>100_bases
CCCCGGCGTCACACCACCTGCGCTGGCTGGCGTCGGCCAACTGCCTCCTCGAGATCCCCGAAGACGTCAGCGAGCTACCC
GCCGGATCGCGGGTAGAAGT

Downstream 100 bases:

>100_bases
TCCAGCCGCGCAGCATCCCCAAACGCGTCGTCAGCCTGCGCATGCTGCCGAGCGCGATGACCGTGGCGGCGATCTGCCTC
GGGCTGTCGTCGGTCAAGTT

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MGPELACPTPHARRIQPMARRPSTDDLRSGPERFMALVKTTVPPVHPAGLPFIGAGLALAAAGRRNRWVRGAGLVAAGAN
AAFFRHPPRVPPTRPGVVVAPADGLICLVEDAEPPAELNLPARPVPRVSIFLSIFDAHVQRIPISGEVVAVEHRPGLFGS
AELAAASEDNERNSVVIRTDTGAQVIAVQIAGLVARRIVCDLTTGDKVTIGDTYGLIRYGSRLDTYLPEGTDIQVLPGQR
AVGGETILAELP

Sequences:

>Translated_252_residues
MGPELACPTPHARRIQPMARRPSTDDLRSGPERFMALVKTTVPPVHPAGLPFIGAGLALAAAGRRNRWVRGAGLVAAGAN
AAFFRHPPRVPPTRPGVVVAPADGLICLVEDAEPPAELNLPARPVPRVSIFLSIFDAHVQRIPISGEVVAVEHRPGLFGS
AELAAASEDNERNSVVIRTDTGAQVIAVQIAGLVARRIVCDLTTGDKVTIGDTYGLIRYGSRLDTYLPEGTDIQVLPGQR
AVGGETILAELP
>Mature_251_residues
GPELACPTPHARRIQPMARRPSTDDLRSGPERFMALVKTTVPPVHPAGLPFIGAGLALAAAGRRNRWVRGAGLVAAGANA
AFFRHPPRVPPTRPGVVVAPADGLICLVEDAEPPAELNLPARPVPRVSIFLSIFDAHVQRIPISGEVVAVEHRPGLFGSA
ELAAASEDNERNSVVIRTDTGAQVIAVQIAGLVARRIVCDLTTGDKVTIGDTYGLIRYGSRLDTYLPEGTDIQVLPGQRA
VGGETILAELP

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR004428 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 26621; Mature: 26490

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPELACPTPHARRIQPMARRPSTDDLRSGPERFMALVKTTVPPVHPAGLPFIGAGLALA
CCCCCCCCCCCHHHCCHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHCCHHHH
AAGRRNRWVRGAGLVAAGANAAFFRHPPRVPPTRPGVVVAPADGLICLVEDAEPPAELNL
HCCCCCCEEECCCEEEECCCCCEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCC
PARPVPRVSIFLSIFDAHVQRIPISGEVVAVEHRPGLFGSAELAAASEDNERNSVVIRTD
CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEEEC
TGAQVIAVQIAGLVARRIVCDLTTGDKVTIGDTYGLIRYGSRLDTYLPEGTDIQVLPGQR
CCCEEEEHHHHHHHHHHHEEEECCCCEEEECCCCCEEEECCCHHHCCCCCCEEEEECCCC
AVGGETILAELP
CCCCCEEEEECC
>Mature Secondary Structure 
GPELACPTPHARRIQPMARRPSTDDLRSGPERFMALVKTTVPPVHPAGLPFIGAGLALA
CCCCCCCCCCHHHCCHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHCCHHHH
AAGRRNRWVRGAGLVAAGANAAFFRHPPRVPPTRPGVVVAPADGLICLVEDAEPPAELNL
HCCCCCCEEECCCEEEECCCCCEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCC
PARPVPRVSIFLSIFDAHVQRIPISGEVVAVEHRPGLFGSAELAAASEDNERNSVVIRTD
CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEEEC
TGAQVIAVQIAGLVARRIVCDLTTGDKVTIGDTYGLIRYGSRLDTYLPEGTDIQVLPGQR
CCCEEEEHHHHHHHHHHHEEEECCCCEEEECCCCCEEEECCCHHHCCCCCCEEEEECCCC
AVGGETILAELP
CCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA