Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is pssA [H]
Identifier: 108797573
GI number: 108797573
Start: 653376
End: 654242
Strand: Reverse
Name: pssA [H]
Synonym: Mmcs_0593
Alternate gene names: 108797573
Gene position: 654242-653376 (Counterclockwise)
Preceding gene: 108797574
Following gene: 108797572
Centisome position: 11.47
GC content: 68.51
Gene sequence:
>867_bases GTGATCCAGCCGCGCAGCATCCCCAAACGCGTCGTCAGCCTGCGCATGCTGCCGAGCGCGATGACCGTGGCGGCGATCTG CCTCGGGCTGTCGTCGGTCAAGTTCGCACTCGACGGCAGGCCCACCGAGGCGATGGCGTTCCTCGCGGTGGCGGCCATCC TCGACGCCCTCGACGGCCGTATCGCCCGCATGCTCAAGGCCACATCGAAGATGGGCGAGGAGATCGACTCACTGGCCGAC GCGGTGAACTTCGGTGTCGCACCGGCGTTCATCGTCTACGGCACACTGCTGTCGCAGTCGCGCATCGGCTGGATCGTGGT GCTGCTCTACGCGGTGTGCATCGTGCTGCGGCTGGCCCGGTTCAACGCGATGCTCGCCGAAGACCTGCCCGCCTACACCA AGGAGTTCTTCGTCGGGATGCCCGCGCCCGCCGGTGCGATCGGCGCGATCGGCCCGCTGGCGGCGAAGATGCAGTTCGGC GACGGCTGGTGGACGTCGGAGATCGCCGTGGTCATCTGGATGGTCGGGGTCTCGCTCCTGGTGGTCAGCACCATCCCGAT GCGCAAGATCCACACGTTCTCGGTCCCGCCGAACATGGTGGCGCCGCTGCTCGCGCTGCTGGCGATCGGTGTGACCGCCT CGATCCTCTACGGCTACCTGGTGATCCTGGTGATCATCCTGGCCTACGTCATCCACATCCCGTTCGCGGTGCGCACCGAG CGCTGGCTCGCCGCCCACCCGGAGACGTGGGATGACAAACCGCGGCAGCGCCGCGCGATCCGCCGCGCCTCCCGTCGCGA GATCCGGCGCACCCAACCGCACCGCCGTTCGGTGGCCCGGCTGGGTCTGCGCAAACCGGGCAGGTGA
Upstream 100 bases:
>100_bases ACGGCTCCCGGCTGGACACCTACCTGCCCGAAGGCACCGACATCCAGGTGCTGCCGGGCCAGCGCGCGGTGGGCGGCGAG ACGATCCTGGCGGAGCTGCC
Downstream 100 bases:
>100_bases CATGACCGAGGCCGGACTGTCCGAGCGCGAACCGAATCTGAGCCACCTGCGGCTCACGGCGCGGTTGAACACCGCCGCCC TCGACTCCCGGCGCGGGGTG
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MIQPRSIPKRVVSLRMLPSAMTVAAICLGLSSVKFALDGRPTEAMAFLAVAAILDALDGRIARMLKATSKMGEEIDSLAD AVNFGVAPAFIVYGTLLSQSRIGWIVVLLYAVCIVLRLARFNAMLAEDLPAYTKEFFVGMPAPAGAIGAIGPLAAKMQFG DGWWTSEIAVVIWMVGVSLLVVSTIPMRKIHTFSVPPNMVAPLLALLAIGVTASILYGYLVILVIILAYVIHIPFAVRTE RWLAAHPETWDDKPRQRRAIRRASRREIRRTQPHRRSVARLGLRKPGR
Sequences:
>Translated_288_residues MIQPRSIPKRVVSLRMLPSAMTVAAICLGLSSVKFALDGRPTEAMAFLAVAAILDALDGRIARMLKATSKMGEEIDSLAD AVNFGVAPAFIVYGTLLSQSRIGWIVVLLYAVCIVLRLARFNAMLAEDLPAYTKEFFVGMPAPAGAIGAIGPLAAKMQFG DGWWTSEIAVVIWMVGVSLLVVSTIPMRKIHTFSVPPNMVAPLLALLAIGVTASILYGYLVILVIILAYVIHIPFAVRTE RWLAAHPETWDDKPRQRRAIRRASRREIRRTQPHRRSVARLGLRKPGR >Mature_288_residues MIQPRSIPKRVVSLRMLPSAMTVAAICLGLSSVKFALDGRPTEAMAFLAVAAILDALDGRIARMLKATSKMGEEIDSLAD AVNFGVAPAFIVYGTLLSQSRIGWIVVLLYAVCIVLRLARFNAMLAEDLPAYTKEFFVGMPAPAGAIGAIGPLAAKMQFG DGWWTSEIAVVIWMVGVSLLVVSTIPMRKIHTFSVPPNMVAPLLALLAIGVTASILYGYLVILVIILAYVIHIPFAVRTE RWLAAHPETWDDKPRQRRAIRRASRREIRRTQPHRRSVARLGLRKPGR
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=121, Percent_Identity=38.0165289256198, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 31591; Mature: 31591
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQPRSIPKRVVSLRMLPSAMTVAAICLGLSSVKFALDGRPTEAMAFLAVAAILDALDGR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH IARMLKATSKMGEEIDSLADAVNFGVAPAFIVYGTLLSQSRIGWIVVLLYAVCIVLRLAR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FNAMLAEDLPAYTKEFFVGMPAPAGAIGAIGPLAAKMQFGDGWWTSEIAVVIWMVGVSLL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH VVSTIPMRKIHTFSVPPNMVAPLLALLAIGVTASILYGYLVILVIILAYVIHIPFAVRTE HHHHCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RWLAAHPETWDDKPRQRRAIRRASRREIRRTQPHRRSVARLGLRKPGR HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MIQPRSIPKRVVSLRMLPSAMTVAAICLGLSSVKFALDGRPTEAMAFLAVAAILDALDGR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH IARMLKATSKMGEEIDSLADAVNFGVAPAFIVYGTLLSQSRIGWIVVLLYAVCIVLRLAR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FNAMLAEDLPAYTKEFFVGMPAPAGAIGAIGPLAAKMQFGDGWWTSEIAVVIWMVGVSLL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH VVSTIPMRKIHTFSVPPNMVAPLLALLAIGVTASILYGYLVILVIILAYVIHIPFAVRTE HHHHCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RWLAAHPETWDDKPRQRRAIRRASRREIRRTQPHRRSVARLGLRKPGR HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]