Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797556
Identifier: 108797556
GI number: 108797556
Start: 636087
End: 637091
Strand: Reverse
Name: 108797556
Synonym: Mmcs_0576
Alternate gene names: NA
Gene position: 637091-636087 (Counterclockwise)
Preceding gene: 108797557
Following gene: 108797549
Centisome position: 11.17
GC content: 63.08
Gene sequence:
>1005_bases ATGACCACCGCTCGCACGTACAACCAGGAGCACGTTCCACGACGGCGCGACGGCCGCCGAAGAATCAGCATCTACTGGAC GTGGAGCTACCCGTGGGAAGCGCAGCGCAACCCGGCAGAAGTCTACAACCGCTTCTCCACCATGACTGAAGTGCGAAACG CACTGTGGCCCAGCTATGAAACTACCGAATACGACGACGCCCACTTCTTGCAGGGCATAGCCGGCACCCTTGAACTGTTC CACCGGTCGACGCTGGCCTTTCAAGAACTCGCCGGTGAGGTGACCGGCCACCCCGTCGCGGTGTTCCAACGCATCGACCA AGCCGGATACCTACTGCCGATCGACGAACGCATTCTCGCGGACACAGACACGCTGATGGTGTTCGGACTCGACCACATTC TGTCCGAGCAGGAGGCGACCGCTGACGAGATCGCGGCGATCAAGCAGTGGCTGCAGCGGGAGGGCACGTGCCTGTTGCTG GCGCCGCATCACGATGTGGGCTTCACCGACGACTTCGACCAGCGCGCCGCGGAGTTCGCACATCACGGCGATCCGCTGGT ACCCCGCCAGCAGCGGTTCGGCCAGTACACGCGCTCGCTGATGAAGGCGCTCGACGTACCGGTCCACAACACCTGGGGTT TACGCCCAGCGGTCGTCGAGCGCACCCGGGAAATCGCGCCGCTGAACGGATTTCGAGACCTCGACACCGCCCGACTGCTC GACAACGTCACGACCTTCAACTTCCACCCCCACCTCCCGCACTATGAATTGACGGCACCCGAAAGCGACACGCTCCGAGT GCTAGGTAGGCAGCGCGTGGACCCCCACAGACCGCATCCATTCACCGACGGCGGCAACACCGAGTTCAACGCGCTCATCT GGATGCCCCCGACCGGCCATCGCTCCGGCGACGTCGTGCTGATCGACTCGACACACTTCACCACCCTCTTCGGCGGCACC GACAGCCTTCGCAATCTCTGGCACAACCTGGCAACCATGAGATGA
Upstream 100 bases:
>100_bases ACAAGGGGATCCCGGCCTTCACCACCCTGCGTGGCGGCGCCTACTTCTTCCTGCCCGGCCTGCGGGGCTTGAGGTATCTG GCCACACTGGGAGACACATC
Downstream 100 bases:
>100_bases GCCTCCGGCGGTTCACCCGCGCCGAGAGTCACCCCCGTTCTGAGCGCCGGGGTTCACTCGGAGAGTTGGAACTCCACCAT CGCCGTGACGGTGTCGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTTARTYNQEHVPRRRDGRRRISIYWTWSYPWEAQRNPAEVYNRFSTMTEVRNALWPSYETTEYDDAHFLQGIAGTLELF HRSTLAFQELAGEVTGHPVAVFQRIDQAGYLLPIDERILADTDTLMVFGLDHILSEQEATADEIAAIKQWLQREGTCLLL APHHDVGFTDDFDQRAAEFAHHGDPLVPRQQRFGQYTRSLMKALDVPVHNTWGLRPAVVERTREIAPLNGFRDLDTARLL DNVTTFNFHPHLPHYELTAPESDTLRVLGRQRVDPHRPHPFTDGGNTEFNALIWMPPTGHRSGDVVLIDSTHFTTLFGGT DSLRNLWHNLATMR
Sequences:
>Translated_334_residues MTTARTYNQEHVPRRRDGRRRISIYWTWSYPWEAQRNPAEVYNRFSTMTEVRNALWPSYETTEYDDAHFLQGIAGTLELF HRSTLAFQELAGEVTGHPVAVFQRIDQAGYLLPIDERILADTDTLMVFGLDHILSEQEATADEIAAIKQWLQREGTCLLL APHHDVGFTDDFDQRAAEFAHHGDPLVPRQQRFGQYTRSLMKALDVPVHNTWGLRPAVVERTREIAPLNGFRDLDTARLL DNVTTFNFHPHLPHYELTAPESDTLRVLGRQRVDPHRPHPFTDGGNTEFNALIWMPPTGHRSGDVVLIDSTHFTTLFGGT DSLRNLWHNLATMR >Mature_333_residues TTARTYNQEHVPRRRDGRRRISIYWTWSYPWEAQRNPAEVYNRFSTMTEVRNALWPSYETTEYDDAHFLQGIAGTLELFH RSTLAFQELAGEVTGHPVAVFQRIDQAGYLLPIDERILADTDTLMVFGLDHILSEQEATADEIAAIKQWLQREGTCLLLA PHHDVGFTDDFDQRAAEFAHHGDPLVPRQQRFGQYTRSLMKALDVPVHNTWGLRPAVVERTREIAPLNGFRDLDTARLLD NVTTFNFHPHLPHYELTAPESDTLRVLGRQRVDPHRPHPFTDGGNTEFNALIWMPPTGHRSGDVVLIDSTHFTTLFGGTD SLRNLWHNLATMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38401; Mature: 38270
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTARTYNQEHVPRRRDGRRRISIYWTWSYPWEAQRNPAEVYNRFSTMTEVRNALWPSYE CCCCCCCCHHCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC TTEYDDAHFLQGIAGTLELFHRSTLAFQELAGEVTGHPVAVFQRIDQAGYLLPIDERILA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCHHHHC DTDTLMVFGLDHILSEQEATADEIAAIKQWLQREGTCLLLAPHHDVGFTDDFDQRAAEFA CCCCEEEEEHHHHHCHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHH HHGDPLVPRQQRFGQYTRSLMKALDVPVHNTWGLRPAVVERTREIAPLNGFRDLDTARLL HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH DNVTTFNFHPHLPHYELTAPESDTLRVLGRQRVDPHRPHPFTDGGNTEFNALIWMPPTGH HCCEEEECCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC RSGDVVLIDSTHFTTLFGGTDSLRNLWHNLATMR CCCCEEEEECCCEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure TTARTYNQEHVPRRRDGRRRISIYWTWSYPWEAQRNPAEVYNRFSTMTEVRNALWPSYE CCCCCCCHHCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC TTEYDDAHFLQGIAGTLELFHRSTLAFQELAGEVTGHPVAVFQRIDQAGYLLPIDERILA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCHHHHC DTDTLMVFGLDHILSEQEATADEIAAIKQWLQREGTCLLLAPHHDVGFTDDFDQRAAEFA CCCCEEEEEHHHHHCHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHH HHGDPLVPRQQRFGQYTRSLMKALDVPVHNTWGLRPAVVERTREIAPLNGFRDLDTARLL HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH DNVTTFNFHPHLPHYELTAPESDTLRVLGRQRVDPHRPHPFTDGGNTEFNALIWMPPTGH HCCEEEECCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC RSGDVVLIDSTHFTTLFGGTDSLRNLWHNLATMR CCCCEEEEECCCEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA