Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797543
Identifier: 108797543
GI number: 108797543
Start: 623681
End: 624304
Strand: Reverse
Name: 108797543
Synonym: Mmcs_0563
Alternate gene names: NA
Gene position: 624304-623681 (Counterclockwise)
Preceding gene: 108797544
Following gene: 108797542
Centisome position: 10.94
GC content: 73.72
Gene sequence:
>624_bases ATGAACCTCGATGACATCGCCGGCGTCGCCCACGAACCGGCGGGCACACCGCGCGGGGTGGTGCTGCTGACCCACGGCGC CGGGGGTAACCGGGACGCGCCGCTGCTGGTCAGGTTCTGCGACGAGTGGGCCGGGCGGGGTTGGCTGGCCGTGCGCTACA ACCTGCCCTACCGCAGGCGCAGACCCAAGGGCCCGCCCTCGGGGTCGGCCACCGCCGACCGGGCGGGGGTGGCCGACGCG GTCGCCGCCGCCCGCGAACTCACCGACGGGCCGGTGATCGCCGGCGGACACTCCTACGGTGGCCGGATGACGTCGATGGC GGTCGCCGACGACGGGGTGGCCCTCGACGTGATGACGCTGTCCTCGTACCCGTTGCATCCGCCCGGCAAGCCCGACCGGG CCCGCACCGAACACCTGCCCCGCATCGGTGTGCCGACGGTGTTCGTGCACGGCACCGCGGATCCGTTCGGGAGCATCGAC GAGCTCACCGCGGCGGCGGCGCTCGTCGCCGGGCCGACCGAACTCGTCGAGATCACCGGCGCGCGTCACGATCTGGGGTC CAAGGCGCTCGACGTGCCGAAACTGGCGGTCGACGCGGCGCTGCGACTGCTGGCCACCGGTTAG
Upstream 100 bases:
>100_bases GTCGCGTTCGCCAAACAGTGGGTGACCGAATGTCTGCGCGCCGCATACCCGTTGGGCCACGGCCACGGTCCGGTCTCCGC GCTGTTCAGGCTGAGCGCCG
Downstream 100 bases:
>100_bases GGTCGAACACATGAGCATGCCGCCGGGCCCGCCACCCCCACCCCCCGGCCAGCCCCCGTACGGCCAGCAGCCCTACGGTC AGCCGGCCTACGGCCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Dienelactone Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Of Alpha/Beta-Hydrolase Fold Family; Esterase/Lipase/Thioesterase Family Protein; Hydrolase Of Alpha/Beta-Hydrolase Fold-Like Protein; Hydrolase Of Alpha/Beta-Hydrolase Fold; Dienelactone Hydrolase Family Protein; Hydrolase
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNLDDIAGVAHEPAGTPRGVVLLTHGAGGNRDAPLLVRFCDEWAGRGWLAVRYNLPYRRRRPKGPPSGSATADRAGVADA VAAARELTDGPVIAGGHSYGGRMTSMAVADDGVALDVMTLSSYPLHPPGKPDRARTEHLPRIGVPTVFVHGTADPFGSID ELTAAAALVAGPTELVEITGARHDLGSKALDVPKLAVDAALRLLATG
Sequences:
>Translated_207_residues MNLDDIAGVAHEPAGTPRGVVLLTHGAGGNRDAPLLVRFCDEWAGRGWLAVRYNLPYRRRRPKGPPSGSATADRAGVADA VAAARELTDGPVIAGGHSYGGRMTSMAVADDGVALDVMTLSSYPLHPPGKPDRARTEHLPRIGVPTVFVHGTADPFGSID ELTAAAALVAGPTELVEITGARHDLGSKALDVPKLAVDAALRLLATG >Mature_207_residues MNLDDIAGVAHEPAGTPRGVVLLTHGAGGNRDAPLLVRFCDEWAGRGWLAVRYNLPYRRRRPKGPPSGSATADRAGVADA VAAARELTDGPVIAGGHSYGGRMTSMAVADDGVALDVMTLSSYPLHPPGKPDRARTEHLPRIGVPTVFVHGTADPFGSID ELTAAAALVAGPTELVEITGARHDLGSKALDVPKLAVDAALRLLATG
Specific function: Unknown
COG id: COG3571
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21418; Mature: 21418
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDDIAGVAHEPAGTPRGVVLLTHGAGGNRDAPLLVRFCDEWAGRGWLAVRYNLPYRRR CCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHEEHHHHCCCCEEEEEECCCHHHC RPKGPPSGSATADRAGVADAVAAARELTDGPVIAGGHSYGGRMTSMAVADDGVALDVMTL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEECCCEEEEEEEE SSYPLHPPGKPDRARTEHLPRIGVPTVFVHGTADPFGSIDELTAAAALVAGPTELVEITG CCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHEEEECC ARHDLGSKALDVPKLAVDAALRLLATG CCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNLDDIAGVAHEPAGTPRGVVLLTHGAGGNRDAPLLVRFCDEWAGRGWLAVRYNLPYRRR CCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHEEHHHHCCCCEEEEEECCCHHHC RPKGPPSGSATADRAGVADAVAAARELTDGPVIAGGHSYGGRMTSMAVADDGVALDVMTL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEECCCEEEEEEEE SSYPLHPPGKPDRARTEHLPRIGVPTVFVHGTADPFGSIDELTAAAALVAGPTELVEITG CCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHEEEECC ARHDLGSKALDVPKLAVDAALRLLATG CCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA