Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797542
Identifier: 108797542
GI number: 108797542
Start: 623053
End: 623670
Strand: Reverse
Name: 108797542
Synonym: Mmcs_0562
Alternate gene names: NA
Gene position: 623670-623053 (Counterclockwise)
Preceding gene: 108797543
Following gene: 108797541
Centisome position: 10.93
GC content: 70.39
Gene sequence:
>618_bases ATGAGCATGCCGCCGGGCCCGCCACCCCCACCCCCCGGCCAGCCCCCGTACGGCCAGCAGCCCTACGGTCAGCCGGCCTA CGGCCAGCCCGCCTACGGACAGCCGTACTTCCCACCGCCCCCGCCGCAGCCCTACGCCGAGATGCGGCCGGCCGGACCGC CGCCCCCGCCCAAGAAGAGCAAGCTCTGGCTGATCCTGGGCCTGGTGGCGCTGACCGTCGTCGTGATCGCCATCGCCGTG GTGCTCTTCGTGGTCCTGGTGGTGCGCGAGGGCACGGTGACAGCAACACAGGTGAAGTTGGGCGACTGCCTCTCCGAGAT CCCGGACGGCAGTGAGGTCAGGACGCTCAAGACCGTCGACTGCGCCGAACCGCACGCCGGCGAGGTGTTCGCGGTGCTCC AGATGCCCGACGGTGACTTCCCCGGACAGGACGCGATGGTCGAGTACGCCAACCGGTGCGCACCCGAACTGGCGAGCTAT TCACCGTCCGCGGTCACCGACGACACCGTGCGACTGTTCGTCCTCTTCCCCACCGACGAGACCTGGTCCGACGGCGACCG GGCGGTGACCTGCGTCGCAACCCTGAACCCGCCGCGCGCGGGTTCACTGAAGGGCTGA
Upstream 100 bases:
>100_bases ACCGGCGCGCGTCACGATCTGGGGTCCAAGGCGCTCGACGTGCCGAAACTGGCGGTCGACGCGGCGCTGCGACTGCTGGC CACCGGTTAGGGTCGAACAC
Downstream 100 bases:
>100_bases CGCCGCCCAGGTCGGCGGCACGGGACCACTCCGATACCTGGGGTACCGTCTACTCATGACTTCGGAGCAGTACGACGCGG TCATCGTGGGCGCCGGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSMPPGPPPPPPGQPPYGQQPYGQPAYGQPAYGQPYFPPPPPQPYAEMRPAGPPPPPKKSKLWLILGLVALTVVVIAIAV VLFVVLVVREGTVTATQVKLGDCLSEIPDGSEVRTLKTVDCAEPHAGEVFAVLQMPDGDFPGQDAMVEYANRCAPELASY SPSAVTDDTVRLFVLFPTDETWSDGDRAVTCVATLNPPRAGSLKG
Sequences:
>Translated_205_residues MSMPPGPPPPPPGQPPYGQQPYGQPAYGQPAYGQPYFPPPPPQPYAEMRPAGPPPPPKKSKLWLILGLVALTVVVIAIAV VLFVVLVVREGTVTATQVKLGDCLSEIPDGSEVRTLKTVDCAEPHAGEVFAVLQMPDGDFPGQDAMVEYANRCAPELASY SPSAVTDDTVRLFVLFPTDETWSDGDRAVTCVATLNPPRAGSLKG >Mature_204_residues SMPPGPPPPPPGQPPYGQQPYGQPAYGQPAYGQPYFPPPPPQPYAEMRPAGPPPPPKKSKLWLILGLVALTVVVIAIAVV LFVVLVVREGTVTATQVKLGDCLSEIPDGSEVRTLKTVDCAEPHAGEVFAVLQMPDGDFPGQDAMVEYANRCAPELASYS PSAVTDDTVRLFVLFPTDETWSDGDRAVTCVATLNPPRAGSLKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21745; Mature: 21614
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPPGPPPPPPGQPPYGQQPYGQPAYGQPAYGQPYFPPPPPQPYAEMRPAGPPPPPKKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC KLWLILGLVALTVVVIAIAVVLFVVLVVREGTVTATQVKLGDCLSEIPDGSEVRTLKTVD CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCEEEEEECC CAEPHAGEVFAVLQMPDGDFPGQDAMVEYANRCAPELASYSPSAVTDDTVRLFVLFPTDE CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC TWSDGDRAVTCVATLNPPRAGSLKG CCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure SMPPGPPPPPPGQPPYGQQPYGQPAYGQPAYGQPYFPPPPPQPYAEMRPAGPPPPPKKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC KLWLILGLVALTVVVIAIAVVLFVVLVVREGTVTATQVKLGDCLSEIPDGSEVRTLKTVD CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCEEEEEECC CAEPHAGEVFAVLQMPDGDFPGQDAMVEYANRCAPELASYSPSAVTDDTVRLFVLFPTDE CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC TWSDGDRAVTCVATLNPPRAGSLKG CCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA