Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is yflN [H]
Identifier: 108797511
GI number: 108797511
Start: 585645
End: 586373
Strand: Reverse
Name: yflN [H]
Synonym: Mmcs_0531
Alternate gene names: 108797511
Gene position: 586373-585645 (Counterclockwise)
Preceding gene: 108797513
Following gene: 108797508
Centisome position: 10.28
GC content: 71.74
Gene sequence:
>729_bases ATGGCAGCAGCCCTGACGGCCGTCACCGACCGGGTCCACCTCGCGCGGACCGATCTCGTGAACTGGACGCTGGTGACCGA CGGCGACGGCGTGCTGCTCATCGACGCCGGCTATCCCGGCCACCGCGACGACGTGGTGGATTCGGTGCGGCGGTTGGGGT TCGGGATCGACGACATCCGCGCGATCCTGTTGACCCACGCCCACATCGACCACTTCGGGTCGGCGATCTGGTTCGCCGAG ACGCATGGGGTGCCGGTCTACACCCACGCCGACGAGGTCGGCCACGCCAGACGTGACTACCTCGAGCAGGTGTCCCCGCT CGCCGTCGCCAGACATGCGTGGCGGCCCCGATGGCTGAAATGGTCGCTGACGATCAGCGGGAAGGGCGGTACGCACCGCG GCGGCATCCCGACCGCACAGGCCTTGACCGACGAGATCGCCGCGACGCTGCCCGGCACCCCGGCGGCGGTCCCGACGCCC GGCCACACCGGCGGGCACTGTTCCTATGTCGTCGACGGCGTACTGGTCAGCGGTGACGCCCTGGTGACCGGCCACCCGCT GCTCAGCGACACCCGCCCGCAGCTGCTGCCCGACCTGTTCAACCACGATCAGGCGCGGTGCGTGGCGAGCCTCGCGGCGC TGGCGGCGCTCGACACCGAGGTGTTGCTGCCCGGACACGGTCCGCTGTGGCGGGGGCCGATCCGCGAGGCCGCGCAGGCC GCGCGCTAG
Upstream 100 bases:
>100_bases CCGCCGACGCCTTGTATCCGAGTTTGAGTTCAGCCATGGTGTCTCCCTGCTCCTCGCGTGCGCACGACTCGTTTCTACTC CACCTGCCTACACTCGCGGC
Downstream 100 bases:
>100_bases GTGAGGATCCGGTAGCCGAGCAGGAAGACCGCGGTCAGGCACAGCCCGCATGCCACCACGATGGTGGGCATCAGGATCAT CTGGTCGAGTTCGTCGGGGT
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MAAALTAVTDRVHLARTDLVNWTLVTDGDGVLLIDAGYPGHRDDVVDSVRRLGFGIDDIRAILLTHAHIDHFGSAIWFAE THGVPVYTHADEVGHARRDYLEQVSPLAVARHAWRPRWLKWSLTISGKGGTHRGGIPTAQALTDEIAATLPGTPAAVPTP GHTGGHCSYVVDGVLVSGDALVTGHPLLSDTRPQLLPDLFNHDQARCVASLAALAALDTEVLLPGHGPLWRGPIREAAQA AR
Sequences:
>Translated_242_residues MAAALTAVTDRVHLARTDLVNWTLVTDGDGVLLIDAGYPGHRDDVVDSVRRLGFGIDDIRAILLTHAHIDHFGSAIWFAE THGVPVYTHADEVGHARRDYLEQVSPLAVARHAWRPRWLKWSLTISGKGGTHRGGIPTAQALTDEIAATLPGTPAAVPTP GHTGGHCSYVVDGVLVSGDALVTGHPLLSDTRPQLLPDLFNHDQARCVASLAALAALDTEVLLPGHGPLWRGPIREAAQA AR >Mature_241_residues AAALTAVTDRVHLARTDLVNWTLVTDGDGVLLIDAGYPGHRDDVVDSVRRLGFGIDDIRAILLTHAHIDHFGSAIWFAET HGVPVYTHADEVGHARRDYLEQVSPLAVARHAWRPRWLKWSLTISGKGGTHRGGIPTAQALTDEIAATLPGTPAAVPTPG HTGGHCSYVVDGVLVSGDALVTGHPLLSDTRPQLLPDLFNHDQARCVASLAALAALDTEVLLPGHGPLWRGPIREAAQAA R
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 25815; Mature: 25684
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAALTAVTDRVHLARTDLVNWTLVTDGDGVLLIDAGYPGHRDDVVDSVRRLGFGIDDIR CCCHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHH AILLTHAHIDHFGSAIWFAETHGVPVYTHADEVGHARRDYLEQVSPLAVARHAWRPRWLK HHHHHHHHHHHHCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE WSLTISGKGGTHRGGIPTAQALTDEIAATLPGTPAAVPTPGHTGGHCSYVVDGVLVSGDA EEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEECCEEECCCE LVTGHPLLSDTRPQLLPDLFNHDQARCVASLAALAALDTEVLLPGHGPLWRGPIREAAQA EEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHH AR CC >Mature Secondary Structure AAALTAVTDRVHLARTDLVNWTLVTDGDGVLLIDAGYPGHRDDVVDSVRRLGFGIDDIR CCHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHH AILLTHAHIDHFGSAIWFAETHGVPVYTHADEVGHARRDYLEQVSPLAVARHAWRPRWLK HHHHHHHHHHHHCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE WSLTISGKGGTHRGGIPTAQALTDEIAATLPGTPAAVPTPGHTGGHCSYVVDGVLVSGDA EEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEECCEEECCCE LVTGHPLLSDTRPQLLPDLFNHDQARCVASLAALAALDTEVLLPGHGPLWRGPIREAAQA EEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHH AR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377; 10972810; 11029430 [H]