Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797513
Identifier: 108797513
GI number: 108797513
Start: 587451
End: 589103
Strand: Reverse
Name: 108797513
Synonym: Mmcs_0533
Alternate gene names: NA
Gene position: 589103-587451 (Counterclockwise)
Preceding gene: 108797514
Following gene: 108797511
Centisome position: 10.33
GC content: 69.93
Gene sequence:
>1653_bases GTGACGGGCTGCGCCCCGCGGCGCAGCTGGGGCGTCGCACTGTTCGCCGTGCTCAGCGCGCTGTACTTCACCGTTGGCGC GGTACTGGTCCTGCGGTTCAACATGTTCGACCCCGATTCGCCGAGCCGGGTGGCCAACGCCGGATACGTGCTGATGAGCC GGCAGCCGCACCTGTCGGCGATCGGGTTCGTGTGGAACCCGCTGCCGAGCCTGGTCGAGATCCCGGTGCTGACGCTCGCC GACTGGTGGCCGGCGCTCAAGACCCACGGCCTCGCGGGGGTCGTGCAGAGCGCGTTGTTCATGGCGGGCGCCGCGGTGAT GGTGCGGCGCATCGCACTCGACCGCGGCGTCGGCACGGTGTGGCGGTGGCTGGCCGTCGGGTGTTTCGCCCTGCACCCGA TGATCGTCACCTACGGCGCCTCCGGGATGAGCGAGGCGGCCGAGACGTTCGCCCTGGTGTGGTGCGTCCGCCATCTCATG CAGTGGGCGCACTCGCACCGGGTCGGCGATCTCGCCTGGGCGGGAATCGCTCTCGGCGTCGGATACCTGTCGCGCTACGA GGCGGTGCCCGCGGCGTGCGGGGCGGCGCTGTTGGTGGCCGTGGTCGCATTCCACCGTGCGCAGCGGGGTCAGCGGGTGA ACTCGGTGATCCTGAACGTCCTGATCGTGATGTTCCCGCTCATCTCGTCGTTCGCGATCTGGGCGCTGACCGGATGGGTG GTGTCCGGTGAACTCTTCGCGACCCTGTCCTCGCAGTACGGGAACGACAGTCAGGTCGCCGCGGCGATGGACCGGGCGAG CCCGCTGGCGGGAGCGGCTTCCGACGACTGGGTGGTGATCGCGGCGCGGCTCCTCGGCATGCAGCCGTTCGTGCTGATCG CCACGGCGGGCGCGGTGGCGTTCGCCGTCCTCCGCCGCAACGCCACCGCCCTCGTCCCGGTCGCCACCCTCGGGCCGGTG CTGGCCTTCGCCGCATGGGGTCAGTTCACCTCGACCACGTTCGGCTGGTTCCGGTTCTACCTGCTCGCGATTCCGCTCGT GATCTGTGTCGCGCTGGCGTTCTGGCAACCGGGCGCCCGGCGCGCGGTCACCGTCGCACGGTCCGACGTGCGGGCGGGCC GCGTCGGCGCGGGGCTGTTGTGCGCATCGTTGGTCATCGGTATCCCGGTCACCGTGACGGCGATGTCCGACGAACGAATC GGCAACCAGCAGTTGCAGTTCGGGCTCAAGTCGCTGACCGACCCGCAGCGGTATCCACCCACCGAACAGTGGTACCGGCG GCTGATGGTCAACGACCGCGCACTGGCCGCCTACTTCGACCGCAAGCGCCTGCCCGAGGGCGCGGTGCTGATGGACACCT TCAACACGTGGGGTGTCTGGCTCGGTTCGCAGCGGCCGAAGCAGTTCGTCATCACCAGCGACTACGACTTCACCGCAACG CTCAACCGCCCGTGGGACTTCGGCGTGCAGTACCTGGTCGCGAGCAACCCCGGGATCAGCAACGCGGACGCGCTGAACAT CCGGTACCCGACCCTGTGGCATGACGGCGCCGGGCTGGGCACGCTCGTGCACTCGGTGTACGGCGCGACCGGCGACGAAC GTTTCCGCGTCTACCGGGTGACCGGCCGGCCTGCGCCGCCGACGGCGGGGTGA
Upstream 100 bases:
>100_bases ACCCGTGGAAGTGGTGGGCGGTGCTGTCGTCGGCCGTCGGTGTGGCCGTGGCGATCGCGGCCGTGGTCATCGTGTTGATG CGACGCCGTCGCCGCGCCCG
Downstream 100 bases:
>100_bases GCCTCAGCCCAGCTTGCGCAGTCGTGGCTCCAGATCCCGTTTGAAGAGCTCGAGGAACCGACGCTGGTCGTGGCCGGGTG CGTGGAACACCAGGTGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MTGCAPRRSWGVALFAVLSALYFTVGAVLVLRFNMFDPDSPSRVANAGYVLMSRQPHLSAIGFVWNPLPSLVEIPVLTLA DWWPALKTHGLAGVVQSALFMAGAAVMVRRIALDRGVGTVWRWLAVGCFALHPMIVTYGASGMSEAAETFALVWCVRHLM QWAHSHRVGDLAWAGIALGVGYLSRYEAVPAACGAALLVAVVAFHRAQRGQRVNSVILNVLIVMFPLISSFAIWALTGWV VSGELFATLSSQYGNDSQVAAAMDRASPLAGAASDDWVVIAARLLGMQPFVLIATAGAVAFAVLRRNATALVPVATLGPV LAFAAWGQFTSTTFGWFRFYLLAIPLVICVALAFWQPGARRAVTVARSDVRAGRVGAGLLCASLVIGIPVTVTAMSDERI GNQQLQFGLKSLTDPQRYPPTEQWYRRLMVNDRALAAYFDRKRLPEGAVLMDTFNTWGVWLGSQRPKQFVITSDYDFTAT LNRPWDFGVQYLVASNPGISNADALNIRYPTLWHDGAGLGTLVHSVYGATGDERFRVYRVTGRPAPPTAG
Sequences:
>Translated_550_residues MTGCAPRRSWGVALFAVLSALYFTVGAVLVLRFNMFDPDSPSRVANAGYVLMSRQPHLSAIGFVWNPLPSLVEIPVLTLA DWWPALKTHGLAGVVQSALFMAGAAVMVRRIALDRGVGTVWRWLAVGCFALHPMIVTYGASGMSEAAETFALVWCVRHLM QWAHSHRVGDLAWAGIALGVGYLSRYEAVPAACGAALLVAVVAFHRAQRGQRVNSVILNVLIVMFPLISSFAIWALTGWV VSGELFATLSSQYGNDSQVAAAMDRASPLAGAASDDWVVIAARLLGMQPFVLIATAGAVAFAVLRRNATALVPVATLGPV LAFAAWGQFTSTTFGWFRFYLLAIPLVICVALAFWQPGARRAVTVARSDVRAGRVGAGLLCASLVIGIPVTVTAMSDERI GNQQLQFGLKSLTDPQRYPPTEQWYRRLMVNDRALAAYFDRKRLPEGAVLMDTFNTWGVWLGSQRPKQFVITSDYDFTAT LNRPWDFGVQYLVASNPGISNADALNIRYPTLWHDGAGLGTLVHSVYGATGDERFRVYRVTGRPAPPTAG >Mature_549_residues TGCAPRRSWGVALFAVLSALYFTVGAVLVLRFNMFDPDSPSRVANAGYVLMSRQPHLSAIGFVWNPLPSLVEIPVLTLAD WWPALKTHGLAGVVQSALFMAGAAVMVRRIALDRGVGTVWRWLAVGCFALHPMIVTYGASGMSEAAETFALVWCVRHLMQ WAHSHRVGDLAWAGIALGVGYLSRYEAVPAACGAALLVAVVAFHRAQRGQRVNSVILNVLIVMFPLISSFAIWALTGWVV SGELFATLSSQYGNDSQVAAAMDRASPLAGAASDDWVVIAARLLGMQPFVLIATAGAVAFAVLRRNATALVPVATLGPVL AFAAWGQFTSTTFGWFRFYLLAIPLVICVALAFWQPGARRAVTVARSDVRAGRVGAGLLCASLVIGIPVTVTAMSDERIG NQQLQFGLKSLTDPQRYPPTEQWYRRLMVNDRALAAYFDRKRLPEGAVLMDTFNTWGVWLGSQRPKQFVITSDYDFTATL NRPWDFGVQYLVASNPGISNADALNIRYPTLWHDGAGLGTLVHSVYGATGDERFRVYRVTGRPAPPTAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59561; Mature: 59430
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGCAPRRSWGVALFAVLSALYFTVGAVLVLRFNMFDPDSPSRVANAGYVLMSRQPHLSA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEECCCCCHH IGFVWNPLPSLVEIPVLTLADWWPALKTHGLAGVVQSALFMAGAAVMVRRIALDRGVGTV HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH WRWLAVGCFALHPMIVTYGASGMSEAAETFALVWCVRHLMQWAHSHRVGDLAWAGIALGV HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GYLSRYEAVPAACGAALLVAVVAFHRAQRGQRVNSVILNVLIVMFPLISSFAIWALTGWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSGELFATLSSQYGNDSQVAAAMDRASPLAGAASDDWVVIAARLLGMQPFVLIATAGAVA HCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHEEEHHHHHH FAVLRRNATALVPVATLGPVLAFAAWGQFTSTTFGWFRFYLLAIPLVICVALAFWQPGAR HHHHHCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RAVTVARSDVRAGRVGAGLLCASLVIGIPVTVTAMSDERIGNQQLQFGLKSLTDPQRYPP CEEEEEHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHCCHHHHHHHHHHCCCCCCCCC TEQWYRRLMVNDRALAAYFDRKRLPEGAVLMDTFNTWGVWLGSQRPKQFVITSDYDFTAT HHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCEEEEECCCCEEEE LNRPWDFGVQYLVASNPGISNADALNIRYPTLWHDGAGLGTLVHSVYGATGDERFRVYRV CCCCCCCCCEEEEECCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHCCCCCCCEEEEEE TGRPAPPTAG ECCCCCCCCC >Mature Secondary Structure TGCAPRRSWGVALFAVLSALYFTVGAVLVLRFNMFDPDSPSRVANAGYVLMSRQPHLSA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEECCCCCHH IGFVWNPLPSLVEIPVLTLADWWPALKTHGLAGVVQSALFMAGAAVMVRRIALDRGVGTV HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH WRWLAVGCFALHPMIVTYGASGMSEAAETFALVWCVRHLMQWAHSHRVGDLAWAGIALGV HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GYLSRYEAVPAACGAALLVAVVAFHRAQRGQRVNSVILNVLIVMFPLISSFAIWALTGWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSGELFATLSSQYGNDSQVAAAMDRASPLAGAASDDWVVIAARLLGMQPFVLIATAGAVA HCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHEEEHHHHHH FAVLRRNATALVPVATLGPVLAFAAWGQFTSTTFGWFRFYLLAIPLVICVALAFWQPGAR HHHHHCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RAVTVARSDVRAGRVGAGLLCASLVIGIPVTVTAMSDERIGNQQLQFGLKSLTDPQRYPP CEEEEEHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHCCHHHHHHHHHHCCCCCCCCC TEQWYRRLMVNDRALAAYFDRKRLPEGAVLMDTFNTWGVWLGSQRPKQFVITSDYDFTAT HHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCEEEEECCCCEEEE LNRPWDFGVQYLVASNPGISNADALNIRYPTLWHDGAGLGTLVHSVYGATGDERFRVYRV CCCCCCCCCEEEEECCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHCCCCCCCEEEEEE TGRPAPPTAG ECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA