Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797451
Identifier: 108797451
GI number: 108797451
Start: 526117
End: 527118
Strand: Reverse
Name: 108797451
Synonym: Mmcs_0471
Alternate gene names: NA
Gene position: 527118-526117 (Counterclockwise)
Preceding gene: 108797453
Following gene: 108797450
Centisome position: 9.24
GC content: 73.85
Gene sequence:
>1002_bases ATGACAACGACGTCATCCCCTCACACCCCGACGCGCCACCACGAACCCCCGCCGGCCTTCCGCGCCGCCGGGATCGTCAT CGCGCTGGCCGCCGTCGTCGCGATCGTCGCGCTCGCGTTCGCGCTGCCCGCGGCGAAATCGGGCCCGCACGACGTGCCGA TCGGCGTCGCGGGCCCGCAGGCGGCCAACGGTCGGATCGCCGCGATGCTCGACGAGCGCGCCCCCGGCGCCTTCGCCGTC ACCTACTACCCCGGCGAGGACGCGCTGCGGGACGCCATCGCCGACCGGCAGGTCTACGGCGGGCTGACCGTCGGTCCGGA CGGACGCAAACTGCTCATCGCCAGCGGGGCCGGCCCGGCCGTCGCCCAGGTGCTGACCCAACTCGGCACCGGCATGGCCG CCCAGACCGGCAGCACACCGACCATCGAGGACGTCGCCCCGCTGCCGGACACCGACCCACGCGGCACCGGACTGGCCGCC TCCGCCCTGCCGATCACCTTGGCCGGCATCCTTCCGGCGATCGCACTGGTCCTCGCCCTGCGCCGGGAAGTCTGGACCCG CTTGGCCGCCGCCGTCGTCTTCAGCGGCGTCGCCGCGTGGACCATCACGGCGCTGCTGTACTACGTCCTCGGCTCGTTCG ACCAGAACTTCTGGGGCGTGACGGCGGGTCTGACGCTCGGACTGCTCGCCTGCGGGCTGCCCATCCTGGGGTTCGGTTCG CTGTTCGGCCGGGTCGGTCTGGCCTGCGGCGCGGCACTGGCCCTGCTGGTCGGCAACCCGCTGTCCGGACTGAACAGCGC ACCCGAGATGCTGCCCCGCGGGTGGGGTGAGGTGGGCCAGTTGTTCCCCCAGGGCGCGACCGCGACCCTGCTGCGTTCGA CGGCGTTCTTCGGCGGGGCCGGGGCGACGTCGGCGATCGTCGTGGCGATCTGCTGGGCGGCGGCCGGCGCGGTACTCGTC GCCCTGGCTGCGCTGCGAGAACGGGCGCGCACAGGGGACTGA
Upstream 100 bases:
>100_bases TGTGACGACAGTATCATTTCAACAGCTATTGAATAGCTGTCGGCGCCGGGTTACGCTCACAGCACAAGAATTCAACGCCA GATGAAAAGGAGGCGGGGCC
Downstream 100 bases:
>100_bases CTTACACTCGCACGACGTGGGACTCGACGACCGTGACGCGCTGGCGGTACTGCGCGACGCGGTCGATCCCCGTCGCGGCT CCGACCCCCTGATCGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTTTSSPHTPTRHHEPPPAFRAAGIVIALAAVVAIVALAFALPAAKSGPHDVPIGVAGPQAANGRIAAMLDERAPGAFAV TYYPGEDALRDAIADRQVYGGLTVGPDGRKLLIASGAGPAVAQVLTQLGTGMAAQTGSTPTIEDVAPLPDTDPRGTGLAA SALPITLAGILPAIALVLALRREVWTRLAAAVVFSGVAAWTITALLYYVLGSFDQNFWGVTAGLTLGLLACGLPILGFGS LFGRVGLACGAALALLVGNPLSGLNSAPEMLPRGWGEVGQLFPQGATATLLRSTAFFGGAGATSAIVVAICWAAAGAVLV ALAALRERARTGD
Sequences:
>Translated_333_residues MTTTSSPHTPTRHHEPPPAFRAAGIVIALAAVVAIVALAFALPAAKSGPHDVPIGVAGPQAANGRIAAMLDERAPGAFAV TYYPGEDALRDAIADRQVYGGLTVGPDGRKLLIASGAGPAVAQVLTQLGTGMAAQTGSTPTIEDVAPLPDTDPRGTGLAA SALPITLAGILPAIALVLALRREVWTRLAAAVVFSGVAAWTITALLYYVLGSFDQNFWGVTAGLTLGLLACGLPILGFGS LFGRVGLACGAALALLVGNPLSGLNSAPEMLPRGWGEVGQLFPQGATATLLRSTAFFGGAGATSAIVVAICWAAAGAVLV ALAALRERARTGD >Mature_332_residues TTTSSPHTPTRHHEPPPAFRAAGIVIALAAVVAIVALAFALPAAKSGPHDVPIGVAGPQAANGRIAAMLDERAPGAFAVT YYPGEDALRDAIADRQVYGGLTVGPDGRKLLIASGAGPAVAQVLTQLGTGMAAQTGSTPTIEDVAPLPDTDPRGTGLAAS ALPITLAGILPAIALVLALRREVWTRLAAAVVFSGVAAWTITALLYYVLGSFDQNFWGVTAGLTLGLLACGLPILGFGSL FGRVGLACGAALALLVGNPLSGLNSAPEMLPRGWGEVGQLFPQGATATLLRSTAFFGGAGATSAIVVAICWAAAGAVLVA LAALRERARTGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33436; Mature: 33305
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTSSPHTPTRHHEPPPAFRAAGIVIALAAVVAIVALAFALPAAKSGPHDVPIGVAGPQ CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AANGRIAAMLDERAPGAFAVTYYPGEDALRDAIADRQVYGGLTVGPDGRKLLIASGAGPA CCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCHH VAQVLTQLGTGMAAQTGSTPTIEDVAPLPDTDPRGTGLAASALPITLAGILPAIALVLAL HHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RREVWTRLAAAVVFSGVAAWTITALLYYVLGSFDQNFWGVTAGLTLGLLACGLPILGFGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHH LFGRVGLACGAALALLVGNPLSGLNSAPEMLPRGWGEVGQLFPQGATATLLRSTAFFGGA HHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCC GATSAIVVAICWAAAGAVLVALAALRERARTGD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTTSSPHTPTRHHEPPPAFRAAGIVIALAAVVAIVALAFALPAAKSGPHDVPIGVAGPQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AANGRIAAMLDERAPGAFAVTYYPGEDALRDAIADRQVYGGLTVGPDGRKLLIASGAGPA CCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCHH VAQVLTQLGTGMAAQTGSTPTIEDVAPLPDTDPRGTGLAASALPITLAGILPAIALVLAL HHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RREVWTRLAAAVVFSGVAAWTITALLYYVLGSFDQNFWGVTAGLTLGLLACGLPILGFGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHH LFGRVGLACGAALALLVGNPLSGLNSAPEMLPRGWGEVGQLFPQGATATLLRSTAFFGGA HHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCC GATSAIVVAICWAAAGAVLVALAALRERARTGD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA